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Report for CCDS7574.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7574.1 Public Homo sapiens 10 ZDHHC6 24 110 108 CCDS HistoryNCBI Gene:64429Re-query CCDS DB by CCDS ID:7574.1Re-query CCDS DB by GeneID:64429See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7574.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369405.7 ENSP00000358413.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369405.7Link to Ensembl Protein Viewer:ENSP00000358413.3Re-query CCDS DB by Nucleotide ID:ENST00000369405Re-query CCDS DB by Protein ID:ENSP00000358413
Original member Current member EBI ENST00000684507.1 ENSP00000507009.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000684507.1Link to Ensembl Protein Viewer:ENSP00000507009.1Re-query CCDS DB by Nucleotide ID:ENST00000684507Re-query CCDS DB by Protein ID:ENSP00000507009
Original member Current member EBI ENST00000683895.1 ENSP00000507661.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000683895.1Link to Ensembl Protein Viewer:ENSP00000507661.1Re-query CCDS DB by Nucleotide ID:ENST00000683895Re-query CCDS DB by Protein ID:ENSP00000507661
Original member Current member NCBI NM_001351082.3 NP_001338011.1 Accepted alive Link to Nucleotide Sequence:NM_001351082.3Link to Protein Sequence:NP_001338011.1Re-query CCDS DB by Nucleotide ID:NM_001351082Re-query CCDS DB by Protein ID:NP_001338011Link to BLAST:NP_001338011.1
Original member Current member NCBI NM_001351083.2 NP_001338012.1 Accepted alive Link to Nucleotide Sequence:NM_001351083.2Link to Protein Sequence:NP_001338012.1Re-query CCDS DB by Nucleotide ID:NM_001351083Re-query CCDS DB by Protein ID:NP_001338012Link to BLAST:NP_001338012.1
Original member Current member NCBI NM_001351084.2 NP_001338013.1 Accepted alive Link to Nucleotide Sequence:NM_001351084.2Link to Protein Sequence:NP_001338013.1Re-query CCDS DB by Nucleotide ID:NM_001351084Re-query CCDS DB by Protein ID:NP_001338013Link to BLAST:NP_001338013.1
Original member Current member NCBI NM_022494.3 NP_071939.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022494.3Link to Protein Sequence:NP_071939.1Re-query CCDS DB by Nucleotide ID:NM_022494Re-query CCDS DB by Protein ID:NP_071939Link to BLAST:NP_071939.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001338011.1 413 Q9H6R6-1 413 100% 0 0
NP_001338012.1 413 Q9H6R6-1 413 100% 0 0
NP_001338013.1 413 Q9H6R6-1 413 100% 0 0
NP_071939.1 413 Q9H6R6-1 413 100% 0 0

Chromosomal Locations for CCDS 7574.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 112430804 112430907 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 112432240 112432286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 112432376 112432521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 112433240 112433281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 112434297 112434464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 112438336 112438389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 112440534 112440695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 112442192 112442351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 112443515 112443606 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 112445170 112445436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1242 nt):
ATGGGTACATTCTGTTCGGTTATCAAGTTTGAAAATCTACAAGAATTAAAGAGACTGTGTCACTGGGGTC
CCATCATAGCCCTTGGTGTTATAGCAATATGTTCTACCATGGCCATGATTGACTCTGTGTTGTGGTATTG
GCCCTTACATACAACTGGAGGAAGTGTGAATTTCATCATGTTGATAAATTGGACTGTCATGATTCTTTAT
AATTACTTCAATGCCATGTTTGTCGGTCCGGGCTTTGTCCCTCTGGGGTGGAAACCGGAAATTTCTCAGG
ATACCATGTATCTCCAGTATTGTAAAGTCTGCCAAGCATACAAGGCACCACGTTCACATCACTGCAGAAA
GTGTAACAGATGTGTGATGAAGATGGACCATCACTGTCCTTGGATCAACAACTGTTGTGGTTACCAAAAT
CATGCTTCGTTCACACTGTTTCTCCTTTTAGCACCACTGGGTTGTATCCATGCTGCTTTCATTTTTGTGA
TGACTATGTACACACAGCTTTATCATCGGCTCTCCTTTGGGTGGAACACAGTGAAGATCGACATGAGTGC
AGCCCGGAGAGATCCTCTTCCAATTGTTCCATTTGGATTAGCTGCATTTGCTACCACCTTGTTTGCCTTG
GGATTAGCTTTAGGAACAACCATAGCTGTTGGGATGTTGTTTTTTATCCAGATGAAAATAATTCTCAGAA
ACAAAACTTCTATTGAGTCATGGATTGAAGAGAAGGCTAAAGATCGAATTCAGTATTATCAACTAGATGA
AGTCTTTGTTTTTCCATATGATATGGGAAGTAGATGGAGGAACTTTAAACAGGTATTTACGTGGTCAGGG
GTCCCTGAAGGAGATGGACTTGAGTGGCCAGTAAGAGAAGGCTGTCACCAATACAGCTTAACAATAGAAC
AGTTGAAACAAAAAGCAGATAAGAGAGTCAGAAGTGTTCGCTATAAAGTAATAGAAGATTATAGTGGTGC
CTGCTGCCCTCTGAATAAAGGAATCAAAACCTTCTTCACAAGTCCCTGCACCGAAGAGCCTCGAATACAG
CTGCAAAAAGGGGAATTCATTTTAGCCACAAGAGGTTTACGATACTGGTTATATGGAGACAAAATTCTTG
ATGATTCCTTTATAGAAGGTGTTTCAAGAATAAGGGGTTGGTTCCCTAGAAAATGTGTGGAAAAGTGTCC
CTGTGATGCTGAAACAGATCAAGCCCCAGAGGGGGAGAAGAAAAATAGATAG

Translation (413 aa):
MGTFCSVIKFENLQELKRLCHWGPIIALGVIAICSTMAMIDSVLWYWPLHTTGGSVNFIMLINWTVMILY
NYFNAMFVGPGFVPLGWKPEISQDTMYLQYCKVCQAYKAPRSHHCRKCNRCVMKMDHHCPWINNCCGYQN
HASFTLFLLLAPLGCIHAAFIFVMTMYTQLYHRLSFGWNTVKIDMSAARRDPLPIVPFGLAAFATTLFAL
GLALGTTIAVGMLFFIQMKIILRNKTSIESWIEEKAKDRIQYYQLDEVFVFPYDMGSRWRNFKQVFTWSG
VPEGDGLEWPVREGCHQYSLTIEQLKQKADKRVRSVRYKVIEDYSGACCPLNKGIKTFFTSPCTEEPRIQ
LQKGEFILATRGLRYWLYGDKILDDSFIEGVSRIRGWFPRKCVEKCPCDAETDQAPEGEKKNR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
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  UCSC Genome Browser
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