NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS30975.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30975.1 Public Homo sapiens 1 MYBPH 24 110 108 CCDS HistoryNCBI Gene:4608Re-query CCDS DB by CCDS ID:30975.1Re-query CCDS DB by GeneID:4608See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30975.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000255416.9 ENSP00000255416.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000255416.9Link to Ensembl Protein Viewer:ENSP00000255416.4Re-query CCDS DB by Nucleotide ID:ENST00000255416Re-query CCDS DB by Protein ID:ENSP00000255416
Original member Current member NCBI NM_004997.3 NP_004988.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004997.3Link to Protein Sequence:NP_004988.2Re-query CCDS DB by Nucleotide ID:NM_004997Re-query CCDS DB by Protein ID:NP_004988Link to BLAST:NP_004988.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004988.2 477 Q13203 477 100% 0 0

Chromosomal Locations for CCDS 30975.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 203168659 203168675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203168906 203169092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203169253 203169389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203170291 203170450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203171061 203171200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203171383 203171578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203171952 203172040 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203174430 203174597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203175327 203175461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 203175551 203175755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1434 nt):
ATGATGGAAAAAAACACCTCCGAGGGCCCTGCCTGCAGTCCAGAGGAGACCGCATCTGAATCTGCCAAGG
TGCCCACAGCAGAGCCTCCCGGAGAAGTGGCAGTATCAGAGTCCACCAGAGAAGAGCAGGTGCCCAAGCC
GCAGGCCCCTGCCCCACAGGCCCCTACAGCCTCCACAGCCACTAAGCCTGCACCCCCAAGTGAAGATGTC
CCCAGTGCCCCACTGCTGCTGACCCTGGATGATGTGAGCAGCAGCTCTGTGACTGTGAGCTGGGAGCCCC
CAGAGAGGCTGGGGAGGCTGGGCCTCCAGGGCTATGTGCTGGAGCTCTGCAGAGAGGGAGCCTCGGAGTG
GGTGCCTGTGAGTGCCCGGCCCATGATGGTGACCCAGCAGACTGTGCGGAACCTGGCTCTGGGAGACAAG
TTCCTCCTGCGCGTGTCTGCAGTGAGTTCTGCAGGGGCTGGCCCGCCGGCCATGCTGGACCAGCCCATCC
ACATCCGAGAGAACATTGAGGCCCCCAAGATCCGTGTCCCCCGCCACCTCCGTCAGACCTACATCCGCCA
GGTGGGAGAGACGGTCAACCTGCAAATCCCCTTCCAGGGGAAGCCTAAGCCTCAGGCCACATGGACCCAC
AACGGCCATGCCCTGGACAGCCAGCGGGTGAGCATGCGCACCGGGGACCAGGACTCCATCCTCTTCATTC
GCTCGGCCCAGCGCTCCGACTCTGGCCGCTACGAGCTCACTGTGCGCGTGGAAGACCTGGAGGCCAAGGC
AGTCATTGACATCCTGGTGATTGAGAAACCTGGACCCCCCAGCAGCATCAGGCTCCTGGACGTCTGGGGC
TGCAATGCTGCTCTTCAGTGGACGCCACCCCAGGACACAGGCAACACAGAGCTCCTGGGCTACATGGTGC
AGAAGGCAGACAAAAAGACAGGGCAATGGTTCACAGTGCTGGAGCGCTACCACCCAACCACCTGCACCAT
CTCTGACCTCATCATCGGCAACTCGTACTCCTTCCGGGTCTTCTCAGAAAACCTGTGTGGACTCAGCACC
TCGGCCACCGTCACCAAGGAGCTCGCCCACATCCAGAAGGCAGATATTGCTGCCAAACCTAAAGGGTTTA
TTGAGCGAGACTTCTCAGAAGCCCCCTCATTCACCCAGCCCCTGGCTGACCACACCTCCACCCCTGGCTA
CAGCACCCAGTTGTTCTGCAGTGTCCGAGCTTCACCCAAGCCCAAGATCATCTGGATGAAAAACAAGATG
GAGATCCAGGGCAACCCCAAATACCGCGCCCTCTCTGAGCAAGGCGTCTGCACCCTAGAGATCCGGAAAC
CCAGCCCCTTTGATTCTGGGGTCTACACCTGCAAGGCCATAAATGTGCTGGGGGAGGCATCTGTGGACTG
CCGGCTGGAGGTCAAAGCCTCAGCCGCACACTGA

Translation (477 aa):
MMEKNTSEGPACSPEETASESAKVPTAEPPGEVAVSESTREEQVPKPQAPAPQAPTASTATKPAPPSEDV
PSAPLLLTLDDVSSSSVTVSWEPPERLGRLGLQGYVLELCREGASEWVPVSARPMMVTQQTVRNLALGDK
FLLRVSAVSSAGAGPPAMLDQPIHIRENIEAPKIRVPRHLRQTYIRQVGETVNLQIPFQGKPKPQATWTH
NGHALDSQRVSMRTGDQDSILFIRSAQRSDSGRYELTVRVEDLEAKAVIDILVIEKPGPPSSIRLLDVWG
CNAALQWTPPQDTGNTELLGYMVQKADKKTGQWFTVLERYHPTTCTISDLIIGNSYSFRVFSENLCGLST
SATVTKELAHIQKADIAAKPKGFIERDFSEAPSFTQPLADHTSTPGYSTQLFCSVRASPKPKIIWMKNKM
EIQGNPKYRALSEQGVCTLEIRKPSPFDSGVYTCKAINVLGEASVDCRLEVKASAAH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH