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Report for CCDS10781.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10781.2 Public Homo sapiens 16 CIAPIN1 24 110 108 CCDS HistoryNCBI Gene:57019Re-query CCDS DB by CCDS ID:10781.2Re-query CCDS DB by GeneID:57019See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10781.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000394391.9 ENSP00000377914.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000394391.9Link to Ensembl Protein Viewer:ENSP00000377914.4Re-query CCDS DB by Nucleotide ID:ENST00000394391Re-query CCDS DB by Protein ID:ENSP00000377914
Original member Current member NCBI NM_020313.4 NP_064709.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020313.4Link to Protein Sequence:NP_064709.2Re-query CCDS DB by Nucleotide ID:NM_020313Re-query CCDS DB by Protein ID:NP_064709Link to BLAST:NP_064709.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_064709.2 312 Q6FI81-1 312 100% 0 0

Chromosomal Locations for CCDS 10781.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 57429170 57429280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57430258 57430339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57431151 57431266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57432487 57432560 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57434044 57434212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57436656 57436732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57439182 57439334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 57440772 57440928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGGCAGATTTTGGGATCTCTGCTGGCCAGTTTGTGGCAGTGGTCTGGGATAAGTCATCCCCAGTGGAGG
CTCTGAAAGGTCTGGTGGATAAGCTTCAAGCGTTAACCGGCAATGAGGGCCGCGTGTCTGTGGAAAACAT
CAAGCAGCTGTTGCAATCTGCCCACAAAGAATCCAGCTTTGACATTATTTTGTCAGGTTTAGTCCCAGGA
AGCACCACTCTGCACAGTGCTGAGATTTTGGCTGAAATCGCCCGGATCCTTCGGCCTGGTGGATGTCTTT
TTCTGAAGGAGCCAGTAGAGACAGCTGTAGATAACAATAGCAAAGTGAAGACAGCATCTAAGCTGTGTTC
AGCCCTGACTCTTTCTGGTCTTGTGGAAGTGAAAGAGCTGCAGCGGGAGCCCCTAACCCCTGAGGAAGTA
CAGTCTGTTCGAGAACACCTTGGTCATGAAAGTGACAACCTGCTGTTTGTTCAGATCACAGGCAAAAAAC
CAAACTTTGAAGTGGGTTCTTCTAGGCAGCTTAAGCTTTCCATCACCAAGAAGTCTTCTCCTTCAGTGAA
ACCTGCTGTGGACCCTGCTGCTGCCAAGCTGTGGACCCTCTCAGCCAACGATATGGAGGACGACAGCATG
GATCTCATTGACTCAGATGAGCTGCTGGATCCAGAAGATTTGAAGAAGCCAGATCCAGCTTCCCTGCGGG
CTGCTTCTTGTGGGGAAGGGAAAAAGAGGAAGGCCTGTAAGAACTGCACCTGTGGCCTTGCCGAAGAACT
GGAAAAAGAGAAGTCAAGGGAACAGATGAGCTCCCAACCCAAGTCAGCTTGTGGAAACTGCTACCTGGGC
GATGCCTTCCGCTGTGCCAGCTGCCCCTACCTTGGGATGCCAGCCTTCAAACCTGGGGAAAAGGTGCTTC
TGAGTGATAGCAATCTTCATGATGCCTAG

Translation (312 aa):
MADFGISAGQFVAVVWDKSSPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILSGLVPG
STTLHSAEILAEIARILRPGGCLFLKEPVETAVDNNSKVKTASKLCSALTLSGLVEVKELQREPLTPEEV
QSVREHLGHESDNLLFVQITGKKPNFEVGSSRQLKLSITKKSSPSVKPAVDPAAAKLWTLSANDMEDDSM
DLIDSDELLDPEDLKKPDPASLRAASCGEGKKRKACKNCTCGLAEELEKEKSREQMSSQPKSACGNCYLG
DAFRCASCPYLGMPAFKPGEKVLLSDSNLHDA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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