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Report for CCDS6266.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6266.2 Public Homo sapiens 8 NDUFAF6 24 110 108 CCDS HistoryNCBI Gene:137682Re-query CCDS DB by CCDS ID:6266.2Re-query CCDS DB by GeneID:137682See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 6266.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000396124.9 ENSP00000379430.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000396124.9Link to Ensembl Protein Viewer:ENSP00000379430.4Re-query CCDS DB by Nucleotide ID:ENST00000396124Re-query CCDS DB by Protein ID:ENSP00000379430
Original member Current member NCBI NM_152416.4 NP_689629.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152416.4Link to Protein Sequence:NP_689629.2Re-query CCDS DB by Nucleotide ID:NM_152416Re-query CCDS DB by Protein ID:NP_689629Link to BLAST:NP_689629.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689629.2 333 Q330K2-1 333 100% 0 0

Chromosomal Locations for CCDS 6266.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 95025009 95025205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95031995 95032094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95035454 95035576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95041570 95041626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95045545 95045647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95046994 95047127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95048457 95048558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95052174 95052230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95057809 95057937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1002 nt):
ATGGCGGCCTCCGCGCACGGCTCTGTCTGGGGGCCGTTGCGGCTTGGCATCCCCGGCCTGTGCTGCCGCC
GGCCGCCTCTGGGTCTGTACGCGCGCATGCGGCGGCTGCCCGGGCCGGAGGTGTCTGGGCGGAGCGTGGC
TGCGGCCAGCGGACCGGGCGCCTGGGGCACTGACCACTACTGCCTGGAGCTGCTGCGGAAACGGGATTAT
GAAGGTTATTTATGCTCCCTGCTGCTCCCTGCAGAATCCCGAAGCTCTGTTTTTGCACTGAGGGCCTTTA
ATGTGGAACTGGCTCAGGTTAAAGACTCAGTCTCTGAGAAAACAATTGGACTGATGCGAATGCAGTTTTG
GAAAAAAACTGTGGAAGATATATACTGTGACAATCCACCACATCAGCCTGTGGCCATTGAACTATGGAAG
GCTGTTAAAAGACATAATCTGACTAAAAGATGGCTTATGAAAATCGTCGATGAAAGAGAAAAAAATCTGG
ATGACAAAGCATATCGTAATATCAAGGAACTGGAAAATTATGCTGAAAACACACAGAGCTCTCTTCTTTA
CTTAACACTAGAAATATTGGGTATAAAGGATCTTCATGCAGATCATGCTGCAAGTCATATTGGAAAAGCA
CAAGGCATTGTCACTTGCTTGAGAGCAACACCATATCATGGGAGCAGAAGAAAGGTGTTCCTTCCCATGG
ATATTTGTATGCTGCATGGTGTTTCACAAGAGGACTTTCTACGGAGGAACCAAGATAAAAATGTGAGAGA
TGTAATATATGACATTGCCAGTCAAGCACACTTGCACCTAAAGCATGCTAGGTCCTTTCACAAAACTGTT
CCTGTGAAAGCATTTCCTGCTTTTCTTCAGACGGTTTCTCTAGAGGACTTTCTAAAGAAAATTCAGCGAG
TGGATTTTGATATATTCCACCCATCTTTACAGCAGAAGAATACATTACTTCCATTATATTTGTATATTCA
GTCATGGAGAAAAACATATTAA

Translation (333 aa):
MAASAHGSVWGPLRLGIPGLCCRRPPLGLYARMRRLPGPEVSGRSVAAASGPGAWGTDHYCLELLRKRDY
EGYLCSLLLPAESRSSVFALRAFNVELAQVKDSVSEKTIGLMRMQFWKKTVEDIYCDNPPHQPVAIELWK
AVKRHNLTKRWLMKIVDEREKNLDDKAYRNIKELENYAENTQSSLLYLTLEILGIKDLHADHAASHIGKA
QGIVTCLRATPYHGSRRKVFLPMDICMLHGVSQEDFLRRNQDKNVRDVIYDIASQAHLHLKHARSFHKTV
PVKAFPAFLQTVSLEDFLKKIQRVDFDIFHPSLQQKNTLLPLYLYIQSWRKTY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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