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Report for CCDS10261.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10261.1 Public Homo sapiens 15 STRA6 24 110 108 CCDS HistoryNCBI Gene:64220Re-query CCDS DB by CCDS ID:10261.1Re-query CCDS DB by GeneID:64220See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10261.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000323940.9 ENSP00000326085.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000323940.9Link to Ensembl Protein Viewer:ENSP00000326085.5Re-query CCDS DB by Nucleotide ID:ENST00000323940Re-query CCDS DB by Protein ID:ENSP00000326085
Original member Current member EBI ENST00000395105.9 ENSP00000378537.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395105.9Link to Ensembl Protein Viewer:ENSP00000378537.4Re-query CCDS DB by Nucleotide ID:ENST00000395105Re-query CCDS DB by Protein ID:ENSP00000378537
Original member Current member EBI ENST00000449139.6 ENSP00000410221.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000449139.6Link to Ensembl Protein Viewer:ENSP00000410221.2Re-query CCDS DB by Nucleotide ID:ENST00000449139Re-query CCDS DB by Protein ID:ENSP00000410221
Original member Current member EBI ENST00000616000.4 ENSP00000479112.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000616000.4Link to Ensembl Protein Viewer:ENSP00000479112.1Re-query CCDS DB by Nucleotide ID:ENST00000616000Re-query CCDS DB by Protein ID:ENSP00000479112
Original member Current member NCBI NM_001142617.2 NP_001136089.1 Accepted alive Link to Nucleotide Sequence:NM_001142617.2Link to Protein Sequence:NP_001136089.1Re-query CCDS DB by Nucleotide ID:NM_001142617Re-query CCDS DB by Protein ID:NP_001136089Link to BLAST:NP_001136089.1
Original member Current member NCBI NM_001142618.2 NP_001136090.1 Accepted alive Link to Nucleotide Sequence:NM_001142618.2Link to Protein Sequence:NP_001136090.1Re-query CCDS DB by Nucleotide ID:NM_001142618Re-query CCDS DB by Protein ID:NP_001136090Link to BLAST:NP_001136090.1
Original member Current member NCBI NM_022369.4 NP_071764.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022369.4Link to Protein Sequence:NP_071764.3Re-query CCDS DB by Nucleotide ID:NM_022369Re-query CCDS DB by Protein ID:NP_071764Link to BLAST:NP_071764.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001136089.1 667 Q9BX79-1 667 100% 0 0
NP_001136090.1 667 Q9BX79-1 667 100% 0 0
NP_071764.3 667 Q9BX79-1 667 100% 0 0

Chromosomal Locations for CCDS 10261.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 74180080 74180243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74180782 74180937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74181295 74181458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74182161 74182262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74182343 74182460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74183856 74183989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74184980 74185055 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74189115 74189277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74190840 74190901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74191167 74191243 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74191424 74191491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74193800 74193922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74195302 74195468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74195652 74195675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74196008 74196147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74197338 74197423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74197752 74197818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 74202155 74202267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2004 nt):
ATGTCGTCCCAGCCAGCAGGGAACCAGACCTCCCCCGGGGCCACAGAGGACTACTCCTATGGCAGCTGGT
ACATCGATGAGCCCCAGGGGGGCGAGGAGCTCCAGCCAGAGGGGGAAGTGCCCTCCTGCCACACCAGCAT
ACCACCCGGCCTGTACCACGCCTGCCTGGCCTCGCTGTCAATCCTTGTGCTGCTGCTCCTGGCCATGCTG
GTGAGGCGCCGCCAGCTCTGGCCTGACTGTGTGCGTGGCAGGCCCGGCCTGCCCAGCCCTGTGGATTTCT
TGGCTGGGGACAGGCCCCGGGCAGTGCCTGCTGCTGTTTTCATGGTCCTCCTGAGCTCCCTGTGTTTGCT
GCTCCCCGACGAGGACGCATTGCCCTTCCTGACTCTCGCCTCAGCACCCAGCCAAGATGGGAAAACTGAG
GCTCCAAGAGGGGCCTGGAAGATACTGGGACTGTTCTATTATGCTGCCCTCTACTACCCTCTGGCTGCCT
GTGCCACGGCTGGCCACACAGCTGCACACCTGCTCGGCAGCACGCTGTCCTGGGCCCACCTTGGGGTCCA
GGTCTGGCAGAGGGCAGAGTGTCCCCAGGTGCCCAAGATCTACAAGTACTACTCCCTGCTGGCCTCCCTG
CCTCTCCTGCTGGGCCTCGGATTCCTGAGCCTTTGGTACCCTGTGCAGCTGGTGAGAAGCTTCAGCCGTA
GGACAGGAGCAGGCTCCAAGGGGCTGCAGAGCAGCTACTCTGAGGAATATCTGAGGAACCTCCTTTGCAG
GAAGAAGCTGGGAAGCAGCTACCACACCTCCAAGCATGGCTTCCTGTCCTGGGCCCGCGTCTGCTTGAGA
CACTGCATCTACACTCCACAGCCAGGATTCCATCTCCCGCTGAAGCTGGTGCTTTCAGCTACACTGACAG
GGACGGCCATTTACCAGGTGGCCCTGCTGCTGCTGGTGGGCGTGGTACCCACTATCCAGAAGGTGAGGGC
AGGGGTCACCACGGATGTCTCCTACCTGCTGGCCGGCTTTGGAATCGTGCTCTCCGAGGACAAGCAGGAG
GTGGTGGAGCTGGTGAAGCACCATCTGTGGGCTCTGGAAGTGTGCTACATCTCAGCCTTGGTCTTGTCCT
GCTTACTCACCTTCCTGGTCCTGATGCGCTCACTGGTGACACACAGGACCAACCTTCGAGCTCTGCACCG
AGGAGCTGCCCTGGACTTGAGTCCCTTGCATCGGAGTCCCCATCCCTCCCGCCAAGCCATATTCTGTTGG
ATGAGCTTCAGTGCCTACCAGACAGCCTTTATCTGCCTTGGGCTCCTGGTGCAGCAGATCATCTTCTTCC
TGGGAACCACGGCCCTGGCCTTCCTGGTGCTCATGCCTGTGCTCCATGGCAGGAACCTCCTGCTCTTCCG
TTCCCTGGAGTCCTCGTGGCCCTTCTGGCTGACTTTGGCCCTGGCTGTGATCCTGCAGAACATGGCAGCC
CATTGGGTCTTCCTGGAGACTCATGATGGACACCCACAGCTGACCAACCGGCGAGTGCTCTATGCAGCCA
CCTTTCTTCTCTTCCCCCTCAATGTGCTGGTGGGTGCCATGGTGGCCACCTGGCGAGTGCTCCTCTCTGC
CCTCTACAACGCCATCCACCTTGGCCAGATGGACCTCAGCCTGCTGCCACCGAGAGCCGCCACTCTCGAC
CCCGGCTACTACACGTACCGAAACTTCTTGAAGATTGAAGTCAGCCAGTCGCATCCAGCCATGACAGCCT
TCTGCTCCCTGCTCCTGCAAGCGCAGAGCCTCCTACCCAGGACCATGGCAGCCCCCCAGGACAGCCTCAG
ACCAGGGGAGGAAGACGAAGGGATGCAGCTGCTACAGACAAAGGACTCCATGGCCAAGGGAGCTAGGCCC
GGGGCCAGCCGCGGCAGGGCTCGCTGGGGTCTGGCCTACACGCTGCTGCACAACCCAACCCTGCAGGTCT
TCCGCAAGACGGCCCTGTTGGGTGCCAATGGTGCCCAGCCCTGA

Translation (667 aa):
MSSQPAGNQTSPGATEDYSYGSWYIDEPQGGEELQPEGEVPSCHTSIPPGLYHACLASLSILVLLLLAML
VRRRQLWPDCVRGRPGLPSPVDFLAGDRPRAVPAAVFMVLLSSLCLLLPDEDALPFLTLASAPSQDGKTE
APRGAWKILGLFYYAALYYPLAACATAGHTAAHLLGSTLSWAHLGVQVWQRAECPQVPKIYKYYSLLASL
PLLLGLGFLSLWYPVQLVRSFSRRTGAGSKGLQSSYSEEYLRNLLCRKKLGSSYHTSKHGFLSWARVCLR
HCIYTPQPGFHLPLKLVLSATLTGTAIYQVALLLLVGVVPTIQKVRAGVTTDVSYLLAGFGIVLSEDKQE
VVELVKHHLWALEVCYISALVLSCLLTFLVLMRSLVTHRTNLRALHRGAALDLSPLHRSPHPSRQAIFCW
MSFSAYQTAFICLGLLVQQIIFFLGTTALAFLVLMPVLHGRNLLLFRSLESSWPFWLTLALAVILQNMAA
HWVFLETHDGHPQLTNRRVLYAATFLLFPLNVLVGAMVATWRVLLSALYNAIHLGQMDLSLLPPRAATLD
PGYYTYRNFLKIEVSQSHPAMTAFCSLLLQAQSLLPRTMAAPQDSLRPGEEDEGMQLLQTKDSMAKGARP
GASRGRARWGLAYTLLHNPTLQVFRKTALLGANGAQP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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