NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS46421.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46421.1 Public Homo sapiens 2 NXPH2 24 110 108 CCDS HistoryNCBI Gene:11249Re-query CCDS DB by CCDS ID:46421.1Re-query CCDS DB by GeneID:11249See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46421.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000272641.4 ENSP00000272641.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000272641.4Link to Ensembl Protein Viewer:ENSP00000272641.3Re-query CCDS DB by Nucleotide ID:ENST00000272641Re-query CCDS DB by Protein ID:ENSP00000272641
Original member Current member NCBI NM_007226.3 NP_009157.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007226.3Link to Protein Sequence:NP_009157.1Re-query CCDS DB by Nucleotide ID:NM_007226Re-query CCDS DB by Protein ID:NP_009157Link to BLAST:NP_009157.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_009157.1 264 O95156 264 100% 0 0

Chromosomal Locations for CCDS 46421.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 138670922 138671665 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 138780191 138780241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (795 nt):
ATGCGCCTGCGGCCGCTGCCCCTCGTGGTGGTCCCTGGCTTGCTGCAGCTGCTATTTTGTGACAGTAAGG
AAGTGGTGCATGCCACGGAGGGGCTGGATTGGGAAGACAAAGATGCTCCAGGGACGTTGGTCGGCAACGT
GGTGCACTCAAGGATCATCAGTCCCCTGCGCCTGTTTGTTAAACAGTCTCCGGTGCCCAAGCCCGGCCCC
ATGGCGTACGCAGACAGCATGGAAAACTTTTGGGATTGGCTGGCCAACATCACGGAGATTCAGGAGCCAT
TGGCAAGAACTAAACGGAGGCCAATAGTAAAAACAGGAAAATTTAAGAAAATGTTTGGATGGGGTGACTT
TCATTCCAACATTAAAACTGTCAAACTCAATCTCCTCATCACAGGGAAAATTGTTGACCATGGAAATGGA
ACCTTCAGTGTGTATTTCCGACATAATTCAACAGGCCTGGGCAATGTTTCAGTGAGCTTGGTACCACCCT
CCAAGGTGGTGGAATTTGAAGTTTCCCCCCAGTCTACCTTGGAGACCAAGGAATCCAAATCTTTCAATTG
TCGCATTGAGTATGAAAAAACAGATCGGGCGAAAAAGACCGCCCTGTGCAACTTTGACCCATCCAAGATC
TGCTACCAGGAGCAGACTCAGAGCCATGTGTCTTGGTTGTGCTCCAAGCCCTTCAAGGTCATTTGCATTT
ACATTGCCTTTTACAGTGTTGATTATAAACTCGTGCAAAAGGTGTGCCCTGACTACAATTACCATAGTGA
GACCCCATACTTATCTTCTGGCTGA

Translation (264 aa):
MRLRPLPLVVVPGLLQLLFCDSKEVVHATEGLDWEDKDAPGTLVGNVVHSRIISPLRLFVKQSPVPKPGP
MAYADSMENFWDWLANITEIQEPLARTKRRPIVKTGKFKKMFGWGDFHSNIKTVKLNLLITGKIVDHGNG
TFSVYFRHNSTGLGNVSVSLVPPSKVVEFEVSPQSTLETKESKSFNCRIEYEKTDRAKKTALCNFDPSKI
CYQEQTQSHVSWLCSKPFKVICIYIAFYSVDYKLVQKVCPDYNYHSETPYLSSG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH