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Report for CCDS34388.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34388.1 Public Homo sapiens 6 MUC21 24 110 108 CCDS HistoryNCBI Gene:394263Re-query CCDS DB by CCDS ID:34388.1Re-query CCDS DB by GeneID:394263See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34388.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376296.3 ENSP00000365473.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000376296.3Link to Ensembl Protein Viewer:ENSP00000365473.3Re-query CCDS DB by Nucleotide ID:ENST00000376296Re-query CCDS DB by Protein ID:ENSP00000365473
Original member Current member NCBI NM_001010909.5 NP_001010909.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001010909.5Link to Protein Sequence:NP_001010909.2Re-query CCDS DB by Nucleotide ID:NM_001010909Re-query CCDS DB by Protein ID:NP_001010909Link to BLAST:NP_001010909.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001010909.2 566 Q5SSG8-1 566 100% 0 0

Chromosomal Locations for CCDS 34388.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 30983959 30984019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30986237 30987681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 30988000 30988194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1701 nt):
ATGAAGATGCAGAAAGGAAATGTTCTCCTTATGTTTGGTCTACTATTGCATTTAGAAGCTGCAACAAATT
CCAATGAGACTAGCACCTCTGCCAACACTGGATCCAGTGTGATCTCCAGTGGAGCCAGCACAGCCACCAA
CTCTGGGTCCAGTGTGACCTCCAGTGGGGTCAGCACAGCCACCATCTCAGGGTCCAGCGTGACCTCCAAT
GGGGTCAGCATAGTCACCAACTCTGAGTTCCATACAACCTCCAGTGGGATCAGCACAGCCACCAACTCTG
AGTTCAGCACAGTGTCCAGTGGGATCAGCATAGCCACCAACTCTGAGTCCAGCACAACCTCCAGTGGGGC
CAGCACAGCCACCAACTCTGAGTCCAGCACACCCTCCAGTGGGGCCAGCACAGCCACCAACTCTGACTCC
AGCACAACCTCCAGTGGGGCTAGCACAGCCACCAACTCTGACTCCAGCACAACCTCCAGTGAGGCCAGCA
CAGCCACCAACTCTGAGTCCAGCACAACCTCCAGTGGGGCCAGCACAGCCACCAACTCTGAGTCCAGCAC
AGTGTCCAGTAGGGCCAGCACTGCCACCAACTCTGAGTCCAGCACAACCTCCAGTGGGGCCAGCACAGCC
ACCAACTCTGAGTCCAGAACGACCTCCAATGGGGCTGGCACAGCCACCAACTCTGAGTCCAGCACGACCT
CCAGTGGGGCCAGCACAGCCACCAACTCTGAGTCCAGCACACCCTCCAGTGGGGCCGGCACAGCCACCAA
CTCTGAGTCCAGCACGACCTCCAGTGGGGCCGGCACAGCCACCAACTCTGAGTCCAGCACAGTGTCCAGT
GGGATCAGCACAGTCACCAATTCTGAGTCCAGCACACCCTCCAGTGGGGCCAACACAGCCACCAACTCTG
AGTCCAGTACGACCTCCAGTGGGGCCAACACAGCCACCAACTCTGACTCCAGCACAACCTCCAGTGGGGC
CAGCACAGCCACCAACTCTGAGTCCAGCACGACCTCCAGTGGGGCCAGCACAGCCACCAACTCTGAGTCC
AGCACAACCTCCAGTGGGGCCAGCACAGCCACCAACTCTGGGTCCAGCACGACCTCCAGTGGGACCAGCA
CAGCCACCAACTCTGAGTCCAGCACAGTGTCCAGTGGGGCCAGCACAGCCACCACCTCTGAGTCCAGCAC
GACCTCCAGTGGGGCCAGCACAGCCACCAACTCTGAGTCCAGCACAGTGTCCAGTGGGGCCAGCACTGCC
ACCAATTCTGAGTCCAGCACAACCTCCAGTGGGGCCAACACAGCCACCAACTCTGGGTCCAGTGTGACCT
CTGCAGGCTCTGGAACAGCAGCTCTGACTGGAATGCACACAACTTCCCATAGTGCATCTACTGCAGTGAG
TGAGGCGAAGCCTGGTGGGTCCCTGGTGCCGTGGGAAATCTTCCTCATCACCCTGGTCTCGGTTGTGGCG
GCCGTGGGGCTCTTTGCTGGGCTCTTCTTCTGTGTGAGAAACAGCCTGTCCCTGAGAAACACCTTTAACA
CAGCTGTCTACCACCCTCATGGCCTCAACCATGGCCTTGGTCCAGGCCCTGGAGGGAATCATGGAGCCCC
CCACAGGCCCAGGTGGAGTCCTAACTGGTTCTGGAGGAGACCAGTATCCTCGATAGCCATGGAGATGAGC
GGGAGGAACAGCGGGCCCTGA

Translation (566 aa):
MKMQKGNVLLMFGLLLHLEAATNSNETSTSANTGSSVISSGASTATNSGSSVTSSGVSTATISGSSVTSN
GVSIVTNSEFHTTSSGISTATNSEFSTVSSGISIATNSESSTTSSGASTATNSESSTPSSGASTATNSDS
STTSSGASTATNSDSSTTSSEASTATNSESSTTSSGASTATNSESSTVSSRASTATNSESSTTSSGASTA
TNSESRTTSNGAGTATNSESSTTSSGASTATNSESSTPSSGAGTATNSESSTTSSGAGTATNSESSTVSS
GISTVTNSESSTPSSGANTATNSESSTTSSGANTATNSDSSTTSSGASTATNSESSTTSSGASTATNSES
STTSSGASTATNSGSSTTSSGTSTATNSESSTVSSGASTATTSESSTTSSGASTATNSESSTVSSGASTA
TNSESSTTSSGANTATNSGSSVTSAGSGTAALTGMHTTSHSASTAVSEAKPGGSLVPWEIFLITLVSVVA
AVGLFAGLFFCVRNSLSLRNTFNTAVYHPHGLNHGLGPGPGGNHGAPHRPRWSPNWFWRRPVSSIAMEMS
GRNSGP


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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