NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS31209.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31209.1 Public Homo sapiens 10 ZNF365 24 110 108 CCDS HistoryNCBI Gene:22891Re-query CCDS DB by CCDS ID:31209.1Re-query CCDS DB by GeneID:22891See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31209.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395254.8 ENSP00000378674.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395254.8Link to Ensembl Protein Viewer:ENSP00000378674.3Re-query CCDS DB by Nucleotide ID:ENST00000395254Re-query CCDS DB by Protein ID:ENSP00000378674
Original member Current member NCBI NM_014951.3 NP_055766.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014951.3Link to Protein Sequence:NP_055766.2Re-query CCDS DB by Nucleotide ID:NM_014951Re-query CCDS DB by Protein ID:NP_055766Link to BLAST:NP_055766.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055766.2 407 Q70YC5-1 407 100% 0 0

Chromosomal Locations for CCDS 31209.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 62376194 62376936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 62388396 62388576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 62398740 62398777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 62399528 62399789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1224 nt):
ATGCAACAGAAGGCTTTTGAGGAAAGCAGATATCCCTGGCAGGAGTCCTTTGAGAATGTTGCTGTGTGCC
TGCCATTACGCTGCCCGAGGTGTGGAGACCATACCAGATTTAGAAGCTTGTCATCCTTGAGGGCCCATCT
GGAGTTCAGTCACAGCTACGAAGAAAGAACCCTCTTGACAAAATGCAGTCTCTTTCCATCCCTCAAAGAC
ACAGACCTAGTCACTTCCTCAGAACTCCTGAAACCGGGAAAATTGCAGAGCAGTGGCAACGTGGTAAAGC
AGAAACCGAGCTATGTTAACTTGTACAGCATTTCACATGAACATTCCAAGGACAGGAAGCCATTTGAGGT
GGTGGCAGAGAGGCCTGTGTCCTATGTGCAGACCTACACTGCCATGGACCTCCATGCAGACTCGCTGGAT
GGGACACGGTCGGGTCCTGGACTGCCCACCTCAGACACCAAAGCTTCTTTCGAGGCACATGTCAGAGAAA
AATTCAATCGAATGGTTGAGGCTGTGGATAGGACCATTGAGAAGAGAATTGATAAACTCACCAAAGAGTT
GGCCCAGAAAACTGCGGAACTGTTGGAAGTTCGGGCAGCTTTTGTGCAGCTGACTCAGAAAAAGCAGGAA
GTTCAGAGACGAGAGCGGGCCTTAAACAGACAGGTGGACGTGGCCGTGGAAATGATAGCTGTACTGAGGC
AACGCCTGACGGAATCTGAGGAGGAGCTTCTTAGGAAAGAAGAAGAAGTTGTCACATTCAACCATTTCCT
GGAAGCGGCAGCTGAGAAGGAGGTTCAAGGGAAAGCCCGGCTCCAGGACTTTATTGAGAATCTGTTACAG
CGGGTAGAACTGGCGGAGAAGCAGCTTGAGTACTATCAGAGCCAGCAGGCCTCTGGCTTTGTCCGTGATC
TCAGCGGGCACGTGCTTACAGACATCTCCTCAAATAGGAAGCCCAAATGCCTAAGCCGAGGGCACCCGCA
TTCGGTATGTAACCACCCTGATCTCAAGGCCCATTTCCACCCAAAGGGAAGGAACCACCTGAAAAAGGCC
AAGGATGACAGAGCCAGCATGCAGCCTGCCAAGGCCATTCACGAACAGGCTGAGTCCTCAAGAGACCTCT
GCAGACCTCCAAAGAAAGGGGAGCTCCTGGGGTTTGGCCGCAAAGGCAACATCAGGCCCAAAATGGCTAA
AAAAAAGCCAACAGCCATTGTGAACATCATCTAA

Translation (407 aa):
MQQKAFEESRYPWQESFENVAVCLPLRCPRCGDHTRFRSLSSLRAHLEFSHSYEERTLLTKCSLFPSLKD
TDLVTSSELLKPGKLQSSGNVVKQKPSYVNLYSISHEHSKDRKPFEVVAERPVSYVQTYTAMDLHADSLD
GTRSGPGLPTSDTKASFEAHVREKFNRMVEAVDRTIEKRIDKLTKELAQKTAELLEVRAAFVQLTQKKQE
VQRRERALNRQVDVAVEMIAVLRQRLTESEEELLRKEEEVVTFNHFLEAAAEKEVQGKARLQDFIENLLQ
RVELAEKQLEYYQSQQASGFVRDLSGHVLTDISSNRKPKCLSRGHPHSVCNHPDLKAHFHPKGRNHLKKA
KDDRASMQPAKAIHEQAESSRDLCRPPKKGELLGFGRKGNIRPKMAKKKPTAIVNII


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH