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Report for CCDS6096.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6096.1 Public Homo sapiens 8 PLPBP 24 110 108 CCDS HistoryNCBI Gene:11212Re-query CCDS DB by CCDS ID:6096.1Re-query CCDS DB by GeneID:11212See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6096.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328195.8 ENSP00000333551.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000328195.8Link to Ensembl Protein Viewer:ENSP00000333551.3Re-query CCDS DB by Nucleotide ID:ENST00000328195Re-query CCDS DB by Protein ID:ENSP00000333551
Original member Current member NCBI NM_007198.4 NP_009129.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007198.4Link to Protein Sequence:NP_009129.1Re-query CCDS DB by Nucleotide ID:NM_007198Re-query CCDS DB by Protein ID:NP_009129Link to BLAST:NP_009129.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_009129.1 275 O94903 275 100% 0 0

Chromosomal Locations for CCDS 6096.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 37762660 37762758 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 37765526 37765633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 37765711 37765746 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 37766280 37766355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 37772755 37772889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 37775339 37775481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 37775918 37776016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 37777973 37778104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (828 nt):
ATGTGGAGAGCTGGCAGCATGTCGGCCGAGCTGGGAGTCGGGTGCGCATTGCGGGCGGTGAACGAGCGCG
TGCAGCAGGCTGTGGCGCGGCGGCCGCGGGATCTCCCAGCCATCCAGCCCCGGCTAGTGGCGGTCAGCAA
AACCAAACCTGCAGACATGGTGATCGAGGCCTATGGACATGGGCAGCGCACTTTTGGCGAGAACTACGTT
CAGGAACTGCTAGAAAAAGCATCAAATCCCAAAATTCTGTCTTTGTGTCCTGAGATCAAATGGCACTTCA
TTGGCCACCTACAGAAACAAAATGTCAACAAATTGATGGCTGTCCCCAATCTCTTCATGCTGGAAACAGT
GGATTCTGTGAAGTTGGCAGACAAAGTGAACAGTTCCTGGCAGAGAAAAGGTTCTCCTGAAAGGTTAAAG
GTTATGGTCCAGATTAACACCAGCGGAGAAGAGAGTAAACATGGCCTTCCACCTTCAGAGACCATAGCCA
TCGTGGAGCACATAAACGCCAAGTGTCCTAACCTGGAGTTTGTGGGGCTGATGACCATAGGAAGCTTTGG
GCATGATCTTAGTCAAGGACCAAATCCAGACTTCCAGCTGTTATTGTCCCTCCGGGAGGAGCTGTGTAAA
AAGCTGAACATCCCTGCTGACCAGGTTGAGCTGAGCATGGGCATGTCCGCGGATTTCCAGCATGCGGTTG
AAGTAGGATCTACAAATGTCCGAATAGGAAGCACGATTTTTGGAGAGCGGGATTACTCAAAGAAACCCAC
CCCGGACAAGTGCGCAGCAGACGTGAAGGCCCCGCTGGAGGTGGCACAGGAGCACTGA

Translation (275 aa):
MWRAGSMSAELGVGCALRAVNERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYV
QELLEKASNPKILSLCPEIKWHFIGHLQKQNVNKLMAVPNLFMLETVDSVKLADKVNSSWQRKGSPERLK
VMVQINTSGEESKHGLPPSETIAIVEHINAKCPNLEFVGLMTIGSFGHDLSQGPNPDFQLLLSLREELCK
KLNIPADQVELSMGMSADFQHAVEVGSTNVRIGSTIFGERDYSKKPTPDKCAADVKAPLEVAQEH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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