NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS8256.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8256.1 Public Homo sapiens 11 THRSP 24 110 108 CCDS HistoryNCBI Gene:7069Re-query CCDS DB by CCDS ID:8256.1Re-query CCDS DB by GeneID:7069See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8256.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000281030.2 ENSP00000281030.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000281030.2Link to Ensembl Protein Viewer:ENSP00000281030.2Re-query CCDS DB by Nucleotide ID:ENST00000281030Re-query CCDS DB by Protein ID:ENSP00000281030
Original member Current member NCBI NM_003251.4 NP_003242.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003251.4Link to Protein Sequence:NP_003242.1Re-query CCDS DB by Nucleotide ID:NM_003251Re-query CCDS DB by Protein ID:NP_003242Link to BLAST:NP_003242.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003242.1 146 Q92748 146 100% 0 0

Chromosomal Locations for CCDS 8256.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 78063882 78064322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (441 nt):
ATGCAGGTGCTAACCAAGCGTTACCCCAAGAACTGCCTGCTGACCGTCATGGACCGGTATGCAGCCGAGG
TGCACAACATGGAGCAGGTGGTGATGATCCCCAGCCTTCTGCGGGACGTGCAGCTGAGTGGGCCTGGGGG
CCAGGCCCAGGCTGAGGCCCCTGATCTCTACACCTACTTCACCATGCTCAAGGCCATCTGTGTGGATGTG
GACCATGGGCTGCTGCCGCGGGAGGAGTGGCAGGCCAAGGTGGCAGGCAGCGAAGAGAATGGAACCGCAG
AGACAGAGGAAGTCGAGGACGAGAGTGCCTCAGGAGAGCTGGACCTGGAAGCCCAGTTCCACCTGCACTT
CTCCAGCCTCCATCACATCCTCATGCACCTCACCGAGAAAGCCCAGGAGGTGACAAGGAAATACCAGGAA
ATGACGGGACAAGTTTGGTAG

Translation (146 aa):
MQVLTKRYPKNCLLTVMDRYAAEVHNMEQVVMIPSLLRDVQLSGPGGQAQAEAPDLYTYFTMLKAICVDV
DHGLLPREEWQAKVAGSEENGTAETEEVEDESASGELDLEAQFHLHFSSLHHILMHLTEKAQEVTRKYQE
MTGQVW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH