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Report for CCDS9905.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9905.1 Public Homo sapiens 14 GOLGA5 24 110 108 CCDS HistoryNCBI Gene:9950Re-query CCDS DB by CCDS ID:9905.1Re-query CCDS DB by GeneID:9950See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9905.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000163416.7 ENSP00000163416.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000163416.7Link to Ensembl Protein Viewer:ENSP00000163416.2Re-query CCDS DB by Nucleotide ID:ENST00000163416Re-query CCDS DB by Protein ID:ENSP00000163416
Original member Current member NCBI NM_005113.4 NP_005104.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005113.4Link to Protein Sequence:NP_005104.4Re-query CCDS DB by Nucleotide ID:NM_005113Re-query CCDS DB by Protein ID:NP_005104Link to BLAST:NP_005104.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005104.4 731 Q8TBA6-1 731 100% 0 0

Chromosomal Locations for CCDS 9905.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 92797438 92797981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92806736 92806963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92809300 92809519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92810254 92810377 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92811551 92811754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92816251 92816421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92819708 92819836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92824546 92824644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92833122 92833347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92835559 92835664 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92837386 92837449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 92839366 92839446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2196 nt):
ATGTCTTGGTTTGTTGATCTTGCTGGAAAGGCAGAAGATCTTTTAAACCGAGTTGATCAAGGGGCTGCAA
CAGCTCTCAGTAGGAAAGACAATGCCAGCAACATATATAGCAAAAATACTGACTATACTGAACTTCACCA
GCAAAATACAGATTTGATATATCAGACTGGACCTAAATCTACGTATATTTCATCAGCAGCTGATAACATT
CGAAATCAAAAAGCCACCATCTTAGCTGGCACTGCAAATGTGAAAGTAGGATCTCGGACACCAGTAGAGG
CCTCTCATCCTGTTGAAAATGCATCTGTTCCTAGGCCTTCATCCCATTTTGTGCGAAGAAAAAAGTCAGA
ACCTGATGATGAGCTGCTGTTTGATTTTCTTAATAGTTCACAGAAGGAGCCTACCGGGAGGGTGGAAATC
AGAAAGGAAAAAGGCAAGACACCTGTCTTTCAGAGCTCTCAGACATCAAGTGTCAGTTCTGTGAACCCCA
GTGTAACCACCATCAAAACCATTGAAGAAAATTCTTTTGGGAGCCAAACCCACGAAGCTGCCAGTAACTC
AGATTCTAGCCATGAAGGTCAAGAGGAATCTTCAAAGGAAAATGTGTCATCAAATGCTGCCTGCCCTGAC
CACACCCCAACACCTAATGATGATGGCAAATCACATGAACTGTCTAACCTTCGACTGGAGAATCAGCTGC
TGAGGAATGAAGTTCAGTCTTTAAATCAAGAAATGGCCTCGTTACTCCAAAGATCCAAAGAGACTCAAGA
AGAATTAAACAAAGCAAGAGCAAGAGTTGAAAAGTGGAATGCTGACCATTCAAAGAGTGATCGAATGACT
CGAGGACTCCGAGCCCAAGTAGATGACCTGACTGAAGCTGTGGCTGCAAAGGATTCCCAGCTGGCTGTAC
TGAAAGTGAGACTCCAGGAAGCTGACCAGCTACTGAGTACTCGCACAGAAGCATTAGAAGCCTTACAGAG
TGAAAAATCACGAATAATGCAGGATCAAAGTGAAGGTAACAGCCTGCAGAATCAAGCTCTGCAGACTTTT
CAGGAGAGACTGCATGAAGCGGATGCCACTCTGAAGAGAGAGCAGGAGAGCTATAAACAGATGCAGAGCG
AGTTTGCTGCACGCCTTAATAAAGTGGAAATGGAACGTCAGAATTTAGCAGAAGCAATTACACTGGCCGA
AAGAAAATACTCAGATGAGAAGAAGAGGGTTGATGAACTGCAGCAGCAAGTCAAGCTGTATAAGTTGAAC
TTGGAGTCCTCTAAGCAGGAATTAATTGACTACAAGCAAAAAGCTACTAGAATACTGCAATCTAAGGAAA
AATTGATTAACAGCTTGAAAGAAGGCTCTGGTTTTGAAGGCCTAGATAGCAGCACTGCCAGTAGCATGGA
GCTGGAAGAACTTCGGCATGAGAAAGAGATGCAGAGGGAGGAAATACAGAAGCTGATGGGCCAGATACAT
CAGCTCAGATCCGAATTACAGGATATGGAGGCACAGCAAGTTAATGAAGCAGAATCAGCAAGAGAACAGT
TACAGGATCTGCATGACCAAATAGCTGGGCAGAAAGCATCCAAACAAGAACTAGAGACAGAACTGGAGCG
ACTGAAGCAGGAGTTCCACTATATAGAAGAAGATCTTTATCGAACAAAGAACACATTGCAAAGCAGAATT
AAAGATCGAGACGAAGAAATTCAAAAACTCAGGAATCAGCTTACCAATAAAACTTTAAGCAATAGCAGTC
AGTCTGAGTTAGAAAATCGACTCCATCAGCTAACAGAGACTCTCATCCAGAAACAGACCATGCTGGAGAG
TCTCAGCACAGAAAAGAACTCCCTGGTCTTTCAACTGGAGCGCCTCGAACAGCAGATGAACTCCGCCTCT
GGAAGTAGTAGTAATGGGTCTTCGATTAATATGTCTGGAATTGACAATGGTGAAGGCACTCGTCTGCGAA
ATGTTCCTGTTCTTTTTAATGACACAGAAACTAATCTGGCAGGAATGTACGGAAAAGTTCGCAAAGCTGC
TAGTTCAATTGATCAGTTTAGTATTCGCCTGGGAATTTTTCTCCGAAGATACCCCATAGCGCGAGTTTTT
GTAATTATATATATGGCTTTGCTTCACCTCTGGGTCATGATTGTTCTGTTGACTTACACACCAGAAATGC
ACCACGACCAACCATATGGCAAATGA

Translation (731 aa):
MSWFVDLAGKAEDLLNRVDQGAATALSRKDNASNIYSKNTDYTELHQQNTDLIYQTGPKSTYISSAADNI
RNQKATILAGTANVKVGSRTPVEASHPVENASVPRPSSHFVRRKKSEPDDELLFDFLNSSQKEPTGRVEI
RKEKGKTPVFQSSQTSSVSSVNPSVTTIKTIEENSFGSQTHEAASNSDSSHEGQEESSKENVSSNAACPD
HTPTPNDDGKSHELSNLRLENQLLRNEVQSLNQEMASLLQRSKETQEELNKARARVEKWNADHSKSDRMT
RGLRAQVDDLTEAVAAKDSQLAVLKVRLQEADQLLSTRTEALEALQSEKSRIMQDQSEGNSLQNQALQTF
QERLHEADATLKREQESYKQMQSEFAARLNKVEMERQNLAEAITLAERKYSDEKKRVDELQQQVKLYKLN
LESSKQELIDYKQKATRILQSKEKLINSLKEGSGFEGLDSSTASSMELEELRHEKEMQREEIQKLMGQIH
QLRSELQDMEAQQVNEAESAREQLQDLHDQIAGQKASKQELETELERLKQEFHYIEEDLYRTKNTLQSRI
KDRDEEIQKLRNQLTNKTLSNSSQSELENRLHQLTETLIQKQTMLESLSTEKNSLVFQLERLEQQMNSAS
GSSSNGSSINMSGIDNGEGTRLRNVPVLFNDTETNLAGMYGKVRKAASSIDQFSIRLGIFLRRYPIARVF
VIIYMALLHLWVMIVLLTYTPEMHHDQPYGK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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