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Report for CCDS4801.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4801.1 Public Homo sapiens 6 ZNF76 24 110 108 CCDS HistoryNCBI Gene:7629Re-query CCDS DB by CCDS ID:4801.1Re-query CCDS DB by GeneID:7629See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4801.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373953.8 ENSP00000363064.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373953.8Link to Ensembl Protein Viewer:ENSP00000363064.3Re-query CCDS DB by Nucleotide ID:ENST00000373953Re-query CCDS DB by Protein ID:ENSP00000363064
Original member Current member NCBI NM_003427.5 NP_003418.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003427.5Link to Protein Sequence:NP_003418.2Re-query CCDS DB by Nucleotide ID:NM_003427Re-query CCDS DB by Protein ID:NP_003418Link to BLAST:NP_003418.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003418.2 570 P36508-1 570 100% 0 0

Chromosomal Locations for CCDS 4801.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 35281152 35281224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35286128 35286208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35286322 35286399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35287646 35287845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35290266 35290382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35290641 35290716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35291278 35291403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35291558 35291737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35292554 35292787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35292881 35293044 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35293751 35293915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35294456 35294569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 35295144 35295248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1713 nt):
ATGGAGAGCTTGGGGCTGCACACGGTGACCCTTAGTGATGGGACAACAGCCTACGTCCAGCAAGCTGTCA
AAGGAGAGAAGCTTCTTGAAGGGCAGGTGATCCAGCTCGAGGATGGGACCACCGCATACATTCACCAGGT
GACGGTACAGAAAGAAGCTCTCTCCTTTGAGGATGGTCAGCCTGTGCAGCTGGAAGATGGCAGCATGGCT
TACATACACCGCACACCCAGAGAAGGCTATGACCCCAGCACCCTGGAAGCCGTCCAACTGGAAGATGGCT
CCACTGCCTACATTCACCACCCTGTGGCTGTGCCATCGGAGAGCACCATCCTGGCCGTACAGACAGAGGT
GGGCTTGGAGGACCTGGCAGCAGAGGATGATGAGGGCTTCAGTGCAGACGCAGTGGTGGCCCTGGAGCAG
TATGCCAGCAAGGTTCTTCATGACAGCCAGATTCCCCGTAATGGAAAAGGGCAGCAAGTTGGAGACAGAG
CATTCCGCTGTGGCTACAAGGGCTGTGGGCGTCTCTACACCACCGCTCATCACTTAAAGGTGCATGAACG
AGCTCATACAGGTGACCGTCCATACAGATGTGACTTCCCCAGCTGTGGAAAGGCCTTTGCCACAGGCTAT
GGACTGAAGAGCCACGTTCGTACCCACACTGGTGAGAAACCATACAAGTGCCCAGAGGAGCTGTGCAGCA
AGGCCTTCAAGACCTCAGGAGACCTGCAGAAGCATGTCCGTACCCACACTGGTGAACGCCCGTTCCAGTG
CCCTTTTGAGGGCTGTGGCCGCTCCTTCACCACATCTAACATCCGCAAGGTACATGTGCGCACCCACACA
GGCGAGAGGCCCTACACCTGCCCGGAGCCCCACTGTGGCCGCGGCTTCACCAGCGCCACCAACTATAAGA
ATCACGTGCGCATCCACACAGGGGAGAAGCCATACGTTTGCACGGTGCCAGGCTGCGGGAAACGCTTCAC
CGAGTACTCGAGCTTGTATAAGCACCACGTGGTGCACACACACTGCAAGCCCTACACCTGCAGCACCTGC
GGCAAGACCTACCGGCAGACCTCCACCTTGGCCATGCACAAGCGCAGTGCCCACGGCGAGCTGGAGGCCA
CGGAGGAGAGCGAGCAGGCCCTCTATGAGCAGCAGCAACTTGAGGCCGCCTCTGCAGCCGAGGAGAGTCC
GCCACCCAAACGACCCCGGATAGCTTACCTTTCGGAGGTGAAGGAAGAGAGAGATGACATCCCAGCCCAG
GTGGCGATGGTGACTGAAGAAGATGGGGCCCCCCAGGTGGCTCTGATCACTCAGGATGGTGCCCAGCAGG
TCAGCCTGTCCCCGGAAGACCTGCAGGCCCTGGGGAGTGCCATCAGTATGGTCACCCAGCACGGCAGCAC
CACCCTCACCATCCCCAGTCCTGATGCCGACCTGGCCACATCTGGCACACATACAGTCACCATGGTCAGC
GCCGATGGCACCCAGACGCAGCCCGTCACAATCATTACCTCTGGGGCTGTGGTGGCTGAGGACTCAAGTG
TAGCATCTCTTCGTCATCAACAGGTGGCACTGTTGGCCACAGCCAACGGAACGCACATTGCAGTGCAGCT
GGAGGAACAGCAGACCTTAGAGGAGGCCATCAATGTGGCCACTGCGGCCATGCAGCAAGGGGCTGTGACC
CTGGAGACAACAGTGTCGGAGAGTGGCTGCTGA

Translation (570 aa):
MESLGLHTVTLSDGTTAYVQQAVKGEKLLEGQVIQLEDGTTAYIHQVTVQKEALSFEDGQPVQLEDGSMA
YIHRTPREGYDPSTLEAVQLEDGSTAYIHHPVAVPSESTILAVQTEVGLEDLAAEDDEGFSADAVVALEQ
YASKVLHDSQIPRNGKGQQVGDRAFRCGYKGCGRLYTTAHHLKVHERAHTGDRPYRCDFPSCGKAFATGY
GLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQKHVRTHTGERPFQCPFEGCGRSFTTSNIRKVHVRTHT
GERPYTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSTC
GKTYRQTSTLAMHKRSAHGELEATEESEQALYEQQQLEAASAAEESPPPKRPRIAYLSEVKEERDDIPAQ
VAMVTEEDGAPQVALITQDGAQQVSLSPEDLQALGSAISMVTQHGSTTLTIPSPDADLATSGTHTVTMVS
ADGTQTQPVTIITSGAVVAEDSSVASLRHQQVALLATANGTHIAVQLEEQQTLEEAINVATAAMQQGAVT
LETTVSESGC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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