NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS11261.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11261.1 Public Homo sapiens 17 ADAP2 24 110 108 CCDS HistoryNCBI Gene:55803Re-query CCDS DB by CCDS ID:11261.1Re-query CCDS DB by GeneID:55803See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11261.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000330889.8 ENSP00000329468.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000330889.8Link to Ensembl Protein Viewer:ENSP00000329468.3Re-query CCDS DB by Nucleotide ID:ENST00000330889Re-query CCDS DB by Protein ID:ENSP00000329468
Original member Current member NCBI NM_018404.3 NP_060874.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018404.3Link to Protein Sequence:NP_060874.1Re-query CCDS DB by Nucleotide ID:NM_018404Re-query CCDS DB by Protein ID:NP_060874Link to BLAST:NP_060874.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060874.1 381 Q9NPF8-1 381 100% 0 0

Chromosomal Locations for CCDS 11261.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 30922015 30922108 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30922940 30923070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30926827 30926918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30931889 30931968 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30934185 30934297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30944907 30945053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30949287 30949370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30953288 30953350 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30954478 30954555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30956241 30956469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 30957835 30957869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1146 nt):
ATGGGCGATCGCGAGCGCAACAAGAAGCGGCTGCTGGAGCTGCTGCGGGCGCCGGACACAGGCAACGCGC
ACTGCGCCGACTGCGGGGCGGCAGATCCCGACTGGGCCTCTTACAAGCTGGGGATCTTCATCTGTCTCAA
CTGCTGCGGCGTCCACCGTAACTTCCCTGACATCAGCAGAGTTAAATCTGTGCGACTTGACTTCTGGGAC
GACAGTATTGTGGAGTTTATGATCCACAATGGAAACCTCCGTGTGAAGGCCAAGTTCGAAGCCAGAGTCC
CAGCTTTCTACTACATCCCCCAGGCCAACGACTGCCTGGTCTTAAAGGAACAATGGATTCGAGCTAAGTA
TGAGAGACGGGAATTTATGGCTGATGGGGAAACCATCTCGCTCCCAGGTAACCGAGAAGGATTCCTGTGG
AAGCGAGGAAGGGACAACTCACAGTTTCTGAGAAGGAAGTTTGTACTTCTGGCAAGAGAAGGCCTCCTGA
AGTACTTCACAAAGGAACAGGGTAAAAGCCCCAAAGCTGTCATCAGCATTAAGGACTTGAATGCCACCTT
CCAGACAGAGAAGATAGGGCACCCCCATGGGCTGCAGATCACCTACAGGAGAGATGGCCACACCAGGAAC
CTGTTTGTGTATCATGAAAGTGGGAAGGAGATAGTGGACTGGTTCAATGCCCTCCGTGCAGCCCGTCTGC
AGTACCTAAAAATGGCCTTTCCTGAACTCCCAGAGTCTGAGCTCGTGCCATTCCTCACCAGGAACTACCT
CAAACAAGGCTTCATGGAAAAGACTGGGCCAAAGCAGAAAGAACCTTTCAAGAAAAGGTGGTTCGCCCTG
GATTGCCATGAGCGGAGGCTGCTCTATTACAAGAACCCACTGGATGCCTTCGAGCAGGGCCAGGTTTTTC
TTGGGAACAAGGAGCAGGGATATGAAGCCTACGAAGACCTGCCCAAGGGCATCCGAGGAAATCGCTGGAA
AGCCGGACTCACCATTGTCACCCCAGAGCGGAGATTTGTCCTCACTTGCCCCAGTGAGAAGGAACAGCAG
GAATGGCTGGAAAGTTTGCGGGGTGTCCTGTCCAGCCCCTTGACGCCCCTCAACCGGCTTACTGCATCAA
CAGAGAGTGGCCGCAGCAGCAGGTGA

Translation (381 aa):
MGDRERNKKRLLELLRAPDTGNAHCADCGAADPDWASYKLGIFICLNCCGVHRNFPDISRVKSVRLDFWD
DSIVEFMIHNGNLRVKAKFEARVPAFYYIPQANDCLVLKEQWIRAKYERREFMADGETISLPGNREGFLW
KRGRDNSQFLRRKFVLLAREGLLKYFTKEQGKSPKAVISIKDLNATFQTEKIGHPHGLQITYRRDGHTRN
LFVYHESGKEIVDWFNALRAARLQYLKMAFPELPESELVPFLTRNYLKQGFMEKTGPKQKEPFKKRWFAL
DCHERRLLYYKNPLDAFEQGQVFLGNKEQGYEAYEDLPKGIRGNRWKAGLTIVTPERRFVLTCPSEKEQQ
EWLESLRGVLSSPLTPLNRLTASTESGRSSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH