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Report for CCDS7889.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7889.1 Public Homo sapiens 11 NAT10 24 110 108 CCDS HistoryNCBI Gene:55226Re-query CCDS DB by CCDS ID:7889.1Re-query CCDS DB by GeneID:55226See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7889.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000257829.8 ENSP00000257829.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000257829.8Link to Ensembl Protein Viewer:ENSP00000257829.3Re-query CCDS DB by Nucleotide ID:ENST00000257829Re-query CCDS DB by Protein ID:ENSP00000257829
Original member Current member NCBI NM_024662.3 NP_078938.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024662.3Link to Protein Sequence:NP_078938.3Re-query CCDS DB by Nucleotide ID:NM_024662Re-query CCDS DB by Protein ID:NP_078938Link to BLAST:NP_078938.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078938.3 1025 Q9H0A0-1 1025 100% 0 0

Chromosomal Locations for CCDS 7889.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 34108226 34108333 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34108742 34108833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34112052 34112223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34113716 34113838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34115823 34115884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34118180 34118294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34118396 34118503 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34122459 34122592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34123762 34123855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34124302 34124400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34127463 34127599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34130813 34130937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34131381 34131531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34132125 34132221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34133026 34133142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34134319 34134420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34134512 34134586 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34135175 34135291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34136642 34136775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34136978 34137026 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34139191 34139287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34139385 34139495 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34140400 34140572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34141089 34141208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34141719 34141817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34142275 34142348 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34143445 34143528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 34146084 34146192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3078 nt):
ATGCATCGGAAAAAGGTGGATAACCGAATCCGGATTCTCATTGAGAATGGAGTAGCTGAGCGGCAAAGAT
CTCTCTTTGTTGTAGTTGGGGATCGAGGAAAAGATCAGGTGGTAATACTTCATCACATGTTATCCAAAGC
AACTGTGAAGGCTCGGCCTTCAGTGCTGTGGTGTTATAAGAAAGAGCTGGGGTTTAGCAGTCACCGGAAG
AAAAGAATGCGACAGCTGCAGAAGAAAATAAAGAATGGAACACTGAACATAAAGCAGGACGACCCCTTTG
AACTCTTCATAGCAGCCACAAACATTCGCTACTGCTACTACAACGAGACCCACAAGATCCTGGGCAATAC
CTTCGGCATGTGTGTGCTGCAGGATTTTGAAGCCTTAACTCCAAACTTGCTGGCCAGGACTGTAGAAACA
GTGGAAGGTGGTGGGCTAGTGGTCATCCTCCTACGGACCATGAACTCACTCAAGCAATTGTACACAGTGA
CTATGGATGTGCATTCCAGGTACAGAACTGAGGCCCATCAGGATGTGGTGGGAAGATTTAATGAAAGGTT
TATTCTGTCTCTGGCCTCTTGTAAGAAGTGTCTCGTCATTGATGACCAGCTCAACATCCTGCCCATCTCC
TCCCACGTTGCCACCATGGAGGCCCTGCCTCCCCAGACTCCGGATGAGAGTCTTGGTCCTTCTGATCTGG
AGCTGAGGGAGTTGAAGGAGAGCTTGCAGGACACCCAGCCTGTGGGTGTGTTGGTGGACTGCTGTAAGAC
TCTAGACCAGGCCAAAGCTGTCTTGAAATTTATCGAGGGCATCTCTGAAAAGACCCTGAGGAGTACTGTT
GCACTCACAGCTGCTCGAGGACGGGGAAAATCTGCAGCCCTGGGATTGGCGATTGCTGGGGCGGTGGCAT
TTGGGTACTCCAATATCTTTGTTACCTCCCCAAGCCCTGATAACCTCCATACTCTGTTTGAATTTGTATT
TAAAGGATTTGATGCTCTGCAATATCAGGAACATCTGGATTATGAGATTATCCAGTCTCTAAATCCTGAA
TTTAACAAAGCAGTGATCAGAGTGAATGTATTTCGAGAACACAGGCAGACTATTCAGTATATACATCCTG
CAGATGCTGTGAAGCTGGGCCAGGCTGAACTAGTTGTGATTGATGAAGCTGCCGCCATCCCCCTCCCCTT
GGTGAAGAGCCTACTTGGCCCCTACCTTGTTTTCATGGCATCCACCATCAATGGCTATGAGGGCACTGGC
CGGTCACTGTCCCTCAAGCTAATTCAGCAGCTCCGTCAACAGAGCGCCCAGAGCCAGGTCAGCACCACTG
CTGAGAATAAGACCACGACGACAGCCAGATTGGCATCAGCGCGGACACTGTATGAGGTTTCCCTCCAGGA
GTCAATCCGATACGCCCCTGGGGATGCAGTGGAGAAGTGGCTGAATGACTTGCTGTGCCTGGATTGCCTC
AACATCACTCGGATAGTCTCAGGCTGCCCCTTGCCTGAAGCTTGTGAACTGTACTATGTTAATAGAGATA
CCCTCTTTTGCTACCACAAGGCCTCTGAAGTTTTCCTCCAACGGCTTATGGCCCTCTACGTGGCTTCTCA
CTACAAGAACTCTCCCAATGATCTCCAGATGCTCTCCGATGCACCTGCTCACCATCTCTTCTGCCTTCTG
CCTCCCGTGCCCCCCACCCAGAATGCCCTTCCAGAAGTGCTTGCTGTTATCCAGGTGTGCCTTGAAGGGG
AGATTTCTCGCCAGTCCATCTTGAACAGTCTGTCTCGAGGCAAGAAGGCTTCAGGGGACCTGATTCCATG
GACAGTGTCAGAACAGTTCCAAGATCCAGACTTTGGTGGTCTGTCTGGTGGAAGGGTCGTTCGCATTGCT
GTTCACCCAGATTATCAAGGGATGGGCTATGGCAGCCGTGCTCTGCAGCTGCTGCAGATGTACTATGAAG
GCAGGTTTCCTTGTCTGGAGGAAAAGGTCCTTGAGACACCACAGGAAATTCACACCGTAAGCAGCGAGGC
TGTCAGCTTGTTGGAAGAGGTCATCACTCCCCGGAAGGACCTGCCTCCTTTACTCCTCAAATTGAATGAG
AGGCCTGCCGAACGCCTGGATTACCTGGGTGTTTCCTATGGCTTGACCCCCAGGCTCCTCAAGTTCTGGA
AACGAGCTGGATTTGTTCCTGTTTATCTGAGACAGACCCCGAATGACCTGACCGGAGAGCACTCGTGCAT
CATGCTGAAGACGCTCACTGATGAGGATGAGGCTGACCAGGGAGGCTGGCTTGCAGCCTTCTGGAAAGAT
TTCCGACGGCGGTTCCTAGCCTTGCTCTCCTACCAGTTCAGTACCTTCTCTCCTTCCCTGGCTCTGAACA
TCATTCAGAACAGGAACATGGGGAAGCCAGCCCAGCCTGCCCTGAGCCGGGAGGAGCTGGAAGCACTCTT
CCTCCCCTATGACCTGAAGCGGCTGGAGATGTATTCACGGAATATGGTGGACTATCACCTCATCATGGAC
ATGATCCCGGCCATCTCTCGCATCTATTTCCTGAACCAGCTGGGGGACCTGGCCCTGTCTGCGGCTCAGT
CGGCTCTTCTCTTGGGGATTGGCCTGCAGCATAAGTCTGTGGACCAGCTGGAAAAGGAGATTGAGCTGCC
CTCGGGCCAGTTGATGGGACTTTTCAACCGGATCATCCGCAAAGTTGTGAAGCTATTTAATGAAGTTCAG
GAAAAGGCCATTGAGGAGCAGATGGTGGCAGCGAAGGATGTGGTCATGGAGCCCACGATGAAGACCCTCA
GTGACGACCTAGATGAAGCAGCAAAGGAATTTCAGGAGAAACACAAGAAGGAAGTAGGGAAGCTGAAGAG
CATGGACCTCTCTGAATACATAATCCGTGGGGACGATGAAGAGTGGAATGAAGTTTTGAACAAAGCTGGG
CCGAACGCCTCGATCATCAGCCTGAAAAGTGACAAGAAAAGGAAGTTAGAGGCCAAACAAGAACCCAAAC
AGAGCAAGAAGTTGAAGAACAGAGAGACAAAGAACAAAAAAGATATGAAACTGAAGCGGAAGAAATAG

Translation (1025 aa):
MHRKKVDNRIRILIENGVAERQRSLFVVVGDRGKDQVVILHHMLSKATVKARPSVLWCYKKELGFSSHRK
KRMRQLQKKIKNGTLNIKQDDPFELFIAATNIRYCYYNETHKILGNTFGMCVLQDFEALTPNLLARTVET
VEGGGLVVILLRTMNSLKQLYTVTMDVHSRYRTEAHQDVVGRFNERFILSLASCKKCLVIDDQLNILPIS
SHVATMEALPPQTPDESLGPSDLELRELKESLQDTQPVGVLVDCCKTLDQAKAVLKFIEGISEKTLRSTV
ALTAARGRGKSAALGLAIAGAVAFGYSNIFVTSPSPDNLHTLFEFVFKGFDALQYQEHLDYEIIQSLNPE
FNKAVIRVNVFREHRQTIQYIHPADAVKLGQAELVVIDEAAAIPLPLVKSLLGPYLVFMASTINGYEGTG
RSLSLKLIQQLRQQSAQSQVSTTAENKTTTTARLASARTLYEVSLQESIRYAPGDAVEKWLNDLLCLDCL
NITRIVSGCPLPEACELYYVNRDTLFCYHKASEVFLQRLMALYVASHYKNSPNDLQMLSDAPAHHLFCLL
PPVPPTQNALPEVLAVIQVCLEGEISRQSILNSLSRGKKASGDLIPWTVSEQFQDPDFGGLSGGRVVRIA
VHPDYQGMGYGSRALQLLQMYYEGRFPCLEEKVLETPQEIHTVSSEAVSLLEEVITPRKDLPPLLLKLNE
RPAERLDYLGVSYGLTPRLLKFWKRAGFVPVYLRQTPNDLTGEHSCIMLKTLTDEDEADQGGWLAAFWKD
FRRRFLALLSYQFSTFSPSLALNIIQNRNMGKPAQPALSREELEALFLPYDLKRLEMYSRNMVDYHLIMD
MIPAISRIYFLNQLGDLALSAAQSALLLGIGLQHKSVDQLEKEIELPSGQLMGLFNRIIRKVVKLFNEVQ
EKAIEEQMVAAKDVVMEPTMKTLSDDLDEAAKEFQEKHKKEVGKLKSMDLSEYIIRGDDEEWNEVLNKAG
PNASIISLKSDKKRKLEAKQEPKQSKKLKNRETKNKKDMKLKRKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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