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Report for CCDS11876.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11876.2 Public Homo sapiens 18 TMEM241 24 110 108 CCDS HistoryNCBI Gene:85019Re-query CCDS DB by CCDS ID:11876.2Re-query CCDS DB by GeneID:85019See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 11876.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000383233.8 ENSP00000372720.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000383233.8Link to Ensembl Protein Viewer:ENSP00000372720.3Re-query CCDS DB by Nucleotide ID:ENST00000383233Re-query CCDS DB by Protein ID:ENSP00000372720
Original member Current member NCBI NM_032933.6 NP_116322.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032933.6Link to Protein Sequence:NP_116322.3Re-query CCDS DB by Nucleotide ID:NM_032933Re-query CCDS DB by Protein ID:NP_116322Link to BLAST:NP_116322.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116322.3 296 Q24JQ0-1 296 100% 0 0

Chromosomal Locations for CCDS 11876.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 23298007 23298067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23309680 23309744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23352196 23352289 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23356594 23356663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23365634 23365668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23368715 23368750 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23370216 23370261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23371422 23371470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23373712 23373763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23377646 23377671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23384990 23385067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23399566 23399647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23421367 23421444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23430631 23430677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23437781 23437852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (891 nt):
ATGTGCGTGAGGAGGTCTCTGGTCGGCCTCACCTTTTGTACCTGCTACCTGGCTTCTTACCTCACGAACA
AGTATGTGCTGTCTGTCTTGAAATTTACCTACCCTACATTATTCCAAGGGTGGCAGACGCTCATTGGTGG
ACTTTTGCTTCATGTGTCCTGGAAACTGGGCTGGGTAGAGATCAACAGCAGTTCAAGATCTCATGTTCTT
GTGTGGCTTCCTGCTTCAGTGCTGTTTGTGGGTATAATCTATGCTGGGTCCAGAGCATTGTCCAGACTGG
CCATTCCTGTGTTTCTCACTTTGCATAATGTAGCTGAAGTTATCATCTGTGGGTACCAGAAGTGTTTTCA
GAAAGAGAAAACATCTCCTGCAAAGATCTGTAGTGCCCTCCTCCTCCTGGCCGCAGCAGGATGCCTTCCC
TTCAATGACTCCCAGTTTAATCCAGATGGATATTTTTGGGCTATAATTCACTTACTCTGTGTAGGGGCTT
ATAAAATTCTACAGAAGTCCCAGAAACCCAGTGCATTAAGTGACATTGACCAGCAATACTTAAACTATAT
ATTCAGTGTGGTGCTCCTGGCATTTGCATCTCATCCCACAGGTGATCTCTTCAGCGTCCTGGACTTCCCA
TTCCTGTACTTCTACAGATTCCATGGTAGCTGCTGTGCCAGTGGATTTTTGGGATTCTTTCTCATGTTCA
GTACAGTGAAGCTAAAAAACCTTCTGGCCCCAGGGCAGTGTGCAGCCTGGATTTTCTTTGCTAAGATAAT
CACAGCTGGCTTATCAATATTGCTGTTTGATGCGATCCTGACCAGTGCAACCACGGGATGCCTCCTGCTC
GGTGCGCTTGGAGAGGCCTTGCTGGTTTTCTCAGAGCGGAAGAGCTCCTGA

Translation (296 aa):
MCVRRSLVGLTFCTCYLASYLTNKYVLSVLKFTYPTLFQGWQTLIGGLLLHVSWKLGWVEINSSSRSHVL
VWLPASVLFVGIIYAGSRALSRLAIPVFLTLHNVAEVIICGYQKCFQKEKTSPAKICSALLLLAAAGCLP
FNDSQFNPDGYFWAIIHLLCVGAYKILQKSQKPSALSDIDQQYLNYIFSVVLLAFASHPTGDLFSVLDFP
FLYFYRFHGSCCASGFLGFFLMFSTVKLKNLLAPGQCAAWIFFAKIITAGLSILLFDAILTSATTGCLLL
GALGEALLVFSERKSS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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