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Report for CCDS674.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
674.1 Public Homo sapiens 1 PIGK 24 110 108 CCDS HistoryNCBI Gene:10026Re-query CCDS DB by CCDS ID:674.1Re-query CCDS DB by GeneID:10026See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 674.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370812.8 ENSP00000359848.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370812.8Link to Ensembl Protein Viewer:ENSP00000359848.3Re-query CCDS DB by Nucleotide ID:ENST00000370812Re-query CCDS DB by Protein ID:ENSP00000359848
Original member Current member NCBI NM_005482.3 NP_005473.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005482.3Link to Protein Sequence:NP_005473.1Re-query CCDS DB by Nucleotide ID:NM_005482Re-query CCDS DB by Protein ID:NP_005473Link to BLAST:NP_005473.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_005473.1 395 Q92643-1 395 100% 0 0

Chromosomal Locations for CCDS 674.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 77092374 77092490 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 77122275 77122359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 77154449 77154621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 77161295 77161405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 77161594 77161711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 77163846 77163942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 77166719 77166830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 77169260 77169395 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 77206640 77206731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 77210436 77210489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 77219310 77219402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1188 nt):
ATGGCCGTCACCGACAGCCTCAGCCGGGCTGCGACTGTCTTGGCAACTGTGTTGCTCTTGTCCTTCGGCA
GCGTGGCCGCTAGTCATATCGAGGATCAAGCAGAACAATTCTTTAGAAGTGGCCATACAAACAACTGGGC
TGTTCTGGTGTGTACATCCCGATTCTGGTTTAATTATCGACATGTTGCAAATACCCTTTCTGTTTATAGA
AGTGTCAAGAGGCTAGGTATTCCTGACAGTCACATTGTCCTAATGCTTGCAGATGATATGGCCTGTAATC
CTAGAAATCCCAAACCAGCTACAGTGTTTAGTCACAAGAATATGGAACTAAATGTGTATGGAGATGATGT
GGAAGTGGATTATAGAAGTTACGAGGTAACTGTGGAGAATTTTTTACGGGTATTAACTGGGAGGATCCCA
CCTAGTACTCCTCGGTCAAAACGTCTTCTTTCTGATGACAGAAGCAATATTCTAATTTATATGACAGGGC
ATGGTGGAAATGGTTTCTTAAAATTTCAAGATTCTGAAGAAATTACCAACATAGAACTCGCGGATGCTTT
TGAACAAATGTGGCAGAAAAGACGCTACAATGAGCTACTGTTTATTATTGATACTTGCCAAGGAGCATCC
ATGTATGAACGATTTTATTCTCCTAACATAATGGCTCTAGCTAGTAGTCAAGTGGGAGAAGATTCACTCT
CGCATCAACCTGATCCTGCAATTGGAGTCCATCTTATGGATAGATACACATTTTATGTCTTGGAATTTTT
GGAAGAAATTAACCCAGCTAGCCAAACTAATATGAATGACCTTTTTCAGGTATGTCCCAAAAGTCTGTGT
GTGTCTACTCCTGGACATCGCACTGATCTTTTTCAGAGGGATCCTAAAAATGTACTGATAACTGATTTCT
TTGGAAGTGTACGGAAAGTGGAAATTACAACAGAGACTATTAAATTGCAACAGGATTCAGAAATCATGGA
AAGCAGCTATAAGGAAGACCAGATGGATGAGAAACTAATGGAACCTCTGAAATATGCTGAACAACTTCCT
GTAGCTCAGATAATACACCAGAAACCGAAGCTGAAAGACTGGCATCCTCCTGGGGGCTTTATTCTGGGAT
TATGGGCACTTATTATCATGGTTTTCTTCAAAACTTATGGAATTAAGCATATGAAGTTCATTTTTTAG

Translation (395 aa):
MAVTDSLSRAATVLATVLLLSFGSVAASHIEDQAEQFFRSGHTNNWAVLVCTSRFWFNYRHVANTLSVYR
SVKRLGIPDSHIVLMLADDMACNPRNPKPATVFSHKNMELNVYGDDVEVDYRSYEVTVENFLRVLTGRIP
PSTPRSKRLLSDDRSNILIYMTGHGGNGFLKFQDSEEITNIELADAFEQMWQKRRYNELLFIIDTCQGAS
MYERFYSPNIMALASSQVGEDSLSHQPDPAIGVHLMDRYTFYVLEFLEEINPASQTNMNDLFQVCPKSLC
VSTPGHRTDLFQRDPKNVLITDFFGSVRKVEITTETIKLQQDSEIMESSYKEDQMDEKLMEPLKYAEQLP
VAQIIHQKPKLKDWHPPGGFILGLWALIIMVFFKTYGIKHMKFIF


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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