NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS11063.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11063.1 Public Homo sapiens 17 CAMTA2 24 110 108 CCDS HistoryNCBI Gene:23125Re-query CCDS DB by CCDS ID:11063.1Re-query CCDS DB by GeneID:23125See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11063.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000348066.8 ENSP00000321813.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000348066.8Link to Ensembl Protein Viewer:ENSP00000321813.7Re-query CCDS DB by Nucleotide ID:ENST00000348066Re-query CCDS DB by Protein ID:ENSP00000321813
Original member Current member NCBI NM_015099.4 NP_055914.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015099.4Link to Protein Sequence:NP_055914.2Re-query CCDS DB by Nucleotide ID:NM_015099Re-query CCDS DB by Protein ID:NP_055914Link to BLAST:NP_055914.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055914.2 1202 O94983-1 1202 100% 0 0

Chromosomal Locations for CCDS 11063.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 4968756 4968819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4968907 4968981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4969150 4969337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4969500 4969520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4969630 4969701 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4969902 4970085 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4970340 4970536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4972232 4972536 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4972769 4972991 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4973175 4973253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4973585 4973769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4974385 4974500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4977058 4977192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4978504 4978630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4979684 4980621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4981225 4981359 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4981678 4981831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4982089 4982160 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4982757 4982892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4982976 4983043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4985880 4985983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4986192 4986222 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3609 nt):
ATGAATACCAAGGACACCACCGAGGTTGCTGAAAACAGCCACCACCTGAAGATCTTTCTCCCCAAGAAGC
TG
CTGGAGTGTCTTCCTCGCTGCCCGCTGCTGCCTCCAGAGAGGCTACGGTGGAATACAAATGAGGAGAT
T
GCATCCTACCTGATCACCTTTGAGAAGCATGATGAGTGGCTGTCTTGTGCCCCAAAGACAAGGCCTCAG
AAT
GGCTCCATCATCCTCTACAATCGCAAGAAGGTGAAATATCGGAAGGATGGTTACCTCTGGAAGAAGC
GG
AAGGATGGGAAGACCACCCGAGAGGACCACATGAAGCTGAAGGTCCAGGGCATGGAGTGTCTCTATGG
C
TGCTACGTTCACTCTTCCATCGTCCCCACATTCCATCGGCGCTGCTACTGGCTGCTCCAGAACCCTGAC
ATC
GTCCTTGTGCACTACCTGAACGTCCCAGCCCTGGAGGACTGTGGAAAGGGCTGCAGCCCCATCTTTT
GT
TCCATCAGCAGCGACCGTCGAGAGTGGCTGAAGTGGTCCCGGGAGGAGTTGTTGGGACAGCTGAAGCC
C
ATGTTTCATGGCATCAAGTGGAGCTGCGGGAATGGAACAGAAGAGTTCTCTGTAGAACACCTGGTGCAG
CAG
ATTTTGGACACCCACCCAACCAAGCCTGCTCCCCGAACCCACGCCTGTCTCTGCAGTGGGGGGCTTG
GT
TCTGGGAGCCTTACCCACAAATGCAGCAGCACGAAACACCGCATCATCTCTCCCAAAGTGGAGCCCCG
A
GCTTTAACCCTGACCTCTATCCCCCACGCTCACCCCCCAGAGCCTCCTCCACTGATAGCCCCACTTCCC
CCA
GAGCTCCCCAAGGCACACACCTCCCCATCTTCTTCCTCTTCTTCCTCCTCATCAGGTTTTGCAGAGC
CC
CTAGAAATCAGACCTAGCCCTCCCACTTCTCGAGGGGGTTCTTCAAGAGGAGGCACTGCTATCCTCCT
C
CTGACAGGACTGGAGCAGCGGGCTGGAGGCTTGACGCCCACCAGGCACTTGGCTCCACAGGCTGATCCT
AGG
CCTTCCATGAGTTTGGCAGTGGTTGTAGGCACTGAGCCTTCTGCCCCACCAGCTCCTCCCAGTCCTG
CC
TTTGACCCTGATCGTTTTCTCAACAGCCCCCAGAGGGGCCAGACATATGGAGGGGGGCAGGGAGTAAG
C
CCAGACTTCCCCGAGGCAGAGGCCGCTCATACCCCCTGTTCTGCCCTAGAGCCTGCTGCTGCCCTGGAG
CCC
CAGGCAGCTGCTCGGGGTCCCCCACCACAGTCAGTAGCAGGTGGGAGAAGAGGAAACTGCTTCTTCA
TC
CAAGATGATGACAGTGGGGAGGAGCTCAAGGGTCACGGGGCTGCCCCACCCATACCTTCACCCCCTCC
C
TCACCCCCACCCTCACCTGCCCCCTTGGAGCCGTCAAGCAGGGTAGGAAGAGGAGAGGCCTTGTTTGGA
GGA
CCTGTTGGGGCCAGTGAACTGGAGCCCTTCAGTCTTTCATCATTCCCAGACCTTATGGGAGAACTCA
TC
AGTGACGAAGCTCCAAGCATCCCTGCTCCGACCCCCCAGCTGTCTCCTGCTCTTAGCACCATCACAGA
C
TTCTCCCCAGAGTGGTCCTACCCAGAGGGTGGGGTCAAGGTGCTCATCACAGGTCCTTGGACCGAAGCC
GCC
GAGCATTACTCCTGTGTCTTTGATCACATCGCAGTGCCAGCCTCACTTGTCCAGCCTGGTGTCTTAC
GC
TGCTACTGTCCCGCCCATGAGGTAGGGCTGGTGTCTTTGCAGGTGGCAGGGCGGGAGGGGCCCCTTTC
T
GCTTCTGTGCTCTTTGAGTATCGAGCCCGCCGATTCCTGTCTCTGCCTAGTACTCAACTTGACTGGCTG
TCA
CTGGACGACAACCAGTTCCGGATGTCCATACTAGAGCGACTGGAGCAGATGGAGAAGCGGATGGCAG
AG
ATCGCAGCAGCTGGGCAGGTGCCTTGCCAGGGTCCTGATGCTCCTCCAGTTCAGGATGAAGGCCAGGG
G
CCTGGGTTCGAAGCACGGGTAGTGGTCTTGGTAGAAAGCATGATCCCACGCTCCACCTGGAAGGGTCCT
GAA
CGTCTGGCCCATGGAAGCCCCTTCCGGGGCATGAGCCTTCTGCACCTGGCTGCTGCCCAGGGCTATG
CC
CGCCTCATCGAGACCCTGAGCCAGTGGCGGAGTGTGGAGACTGGAAGCTTGGACTTAGAGCAGGAGGT
T
GACCCGCTCAACGTGGATCATTTCTCTTGCACCCCTCTGATGTGGGCTTGTGCCCTGGGACACCTGGAA
GCT
GCTGTGCTCCTTTTCCGTTGGAACCGACAGGCACTGAGCATTCCCGACTCTCTGGGCCGTCTGCCAT
TG
TCTGTGGCTCATTCCCGGGGTCATGTGCGCCTTGCCCGCTGCCTTGAGGAACTACAGAGACAGGAGCC
T
TCGGTGGAGCCCCCATTTGCCCTATCGCCACCCTCCTCCAGCCCAGACACTGGTCTGAGCAGCGTCTCC
TCG
CCCTCGGAGCTGTCGGATGGCACCTTTTCCGTCACGTCAGCCTATTCTAGTGCCCCAGATGGCAGTC
CC
CCCCCTGCACCTCTGCCAGCCTCTGAGATGACTATGGAGGACATGGCCCCAGGCCAGCTTTCCTCTGG
T
GTCCCAGAAGCCCCCCTACTCCTCATGGACTATGAGGCTACCAACTCCAAGGGGCCCCTCTCCTCCCTT
CCT
GCCCTCCCACCAGCTTCAGATGATGGGGCTGCTCCAGAGGACGCTGACAGCCCACAGGCTGTGGATG
TG
ATCCCGGTGGACATGATCTCACTAGCCAAGCAGATCATCGAAGCCACACCGGAGCGGATTAAACGAGA
G
GACTTCGTGGGGCTGCCCGAGGCTGGAGCCTCAATGCGGGAGCGGACAGGGGCTGTGGGGCTCAGTGAG
ACC
ATGTCCTGGCTGGCCAGCTACCTGGAGAATGTGGACCATTTCCCCAGCTCAACCCCTCCCAGCGAAC
TG
CCCTTTGAGCGAGGTCGCCTGGCTGTCCCTTCAGCACCCTCCTGGGCAGAGTTTCTCTCTGCATCCAC
C
AGTGGCAAGATGGAAAGTGATTTTGCCCTGCTGACACTATCAGATCACGAGCAGCGGGAACTGTATGAG
GCT
GCCCGAGTCATCCAGACGGCCTTCCGAAAGTACAAGGGCCGGCGGCTGAAGGAGCAGCAGGAGGTAG
CA
GCAGCTGTAATCCAGCGCTGTTACCGGAAGTACAAGCAGCTGACCTGGATTGCACTTAAGTTTGCACT
C
TATAAGAAGATGACCCAGGCGGCCATCCTGATCCAGAGCAAGTTCCGAAGCTACTATGAACAGAAGCGA
TTT
CAGCAGAGCCGCCGAGCGGCTGTGCTCATCCAGCAGCACTACCGCTCCTACCGCCGCAGGCCCGGCC
CT
CCCCACCGGACTTCGGCCACCCTGCCTGCCCGCAACAAAGGCTCCTTTCTCACCAAGAAGCAGGACCA
G
GCAGCCCGGAAGATCATGAGATTCCTGCGGCGCTGCCGACACAGGATGAGGGAACTGAAGCAGAACCAG
GAG
CTGGAAGGGCTTCCCCAGCCGGGACTGGCCACATGA


Translation (1202 aa):
MNTKDTTEVAENSHHLKIFLPKKLLECLPRCPLLPPERLRWNTNEEIASYLITFEKHDEWLSCAPKTRPQ
N
GSIILYNRKKVKYRKDGYLWKKRKDGKTTREDHMKLKVQGME
CLYGCYVHSSIVPTFHRRCYWLLQNPD
I
VLVHYLNVPALEDCGKGCSPIFCSISSDRREWLKWSREELLGQLKPM
FHGIKWSCGNGTEEFSVEHLVQ
Q
ILDTHPTKPAPRTHACLCSGGL
GSGSLTHKCSSTKHRIISPKVEPRALTLTSIPHAHPPEPPPLIAPLP
P
ELPKAHTSPSSSSSSSSSGFAEPLEIRPSPPTSRGGSSRGGTAILLLTGLEQRAGGLTPTRHLAPQADP
R
PSMSLAVVVGTEPSAPPAPPSPAFDPDRFLNSPQRGQTYGGGQGVSPDFPEAEAAHTPCSALEPAAALE
P
QAAARGPPPQSVAGGRRGNCFFIQDDDSGEELKGHGAAPPIPSPPPSPPPSPAPLEPSSRVGRGEALFG
G
PVGASELEPFSLSSFPDLMGELISDEAPSIPAPTPQLSPALSTITDFSPEWSYPE
GGVKVLITGPWTEA
A
EHYSCVFDHIAVPASLVQPGVLRCYCP
AHEVGLVSLQVAGREGPLSASVLFEYRARRFLSLPSTQLDWL
S
LD
DNQFRMSILERLEQMEKRMAEIAAAGQVPCQGPDAPPVQDEGQGPGFEARVVVLVESMIPRSTWKGP
E
RLAHGSPFRGMSLLHLAAAQGYARLIETLSQW
RSVETGSLDLEQEVDPLNVDHFSCTPLMWACALGHLE
A
AVLLFRWNRQALSIPDSLGRLPLSVAHSRGHVRLARCLEELQRQEPSVEPPFALSPPSSSPDT
GLSSVS
S
PSELSDGTFSVTSAYSSAPDGSPPPAPLPASEMTMEDMAPGQLSSGVPEAPLLLMDYEATNSKGPLSSL
P
ALPPASDDGAAPEDADSPQAVDVIP
VDMISLAKQIIEATPERIKREDFVGLPEAGASMRERTGAVGLSE
T
MSWLASYLENVDHFPSSTPP
SELPFERGRLAVPSAPSWAEFLSASTSGKMESDFALLTLSDHEQRELYE
A
ARVIQTAFRKYK
GRRLKEQQEVAAAVIQRCYRKYKQLTWIALKFALYKKMTQAAILIQSKFRSYYEQKR
F
QQSRRAAVLIQQHYRSYRRRPGPPHRTSATLPARN
KGSFLTKKQDQAARKIMRFLRRCRHRMRELKQNQ
E
LEGLPQPGLAT




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser