NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS14087.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14087.1 Public Homo sapiens 22 TUBGCP6 24 110 108 CCDS HistoryNCBI Gene:85378Re-query CCDS DB by CCDS ID:14087.1Re-query CCDS DB by GeneID:85378See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14087.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000248846.10 ENSP00000248846.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000248846.10Link to Ensembl Protein Viewer:ENSP00000248846.5Re-query CCDS DB by Nucleotide ID:ENST00000248846Re-query CCDS DB by Protein ID:ENSP00000248846
Original member Current member NCBI NM_020461.4 NP_065194.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020461.4Link to Protein Sequence:NP_065194.3Re-query CCDS DB by Nucleotide ID:NM_020461Re-query CCDS DB by Protein ID:NP_065194Link to BLAST:NP_065194.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_065194.3 1819 Q96RT7-1 1819 100% 0 0

Chromosomal Locations for CCDS 14087.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 50217736 50217827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50217918 50218117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50218189 50218402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50218488 50218620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50218703 50218897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50219068 50219209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50219288 50219456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50219644 50219791 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50219957 50220015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50220251 50221874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50222028 50222102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50222454 50222592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50224141 50224256 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50224332 50224420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50224511 50224592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50225794 50225943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50226050 50226189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50226287 50226378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50226733 50226842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50226999 50227077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50227907 50228028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50229404 50229577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50233316 50233526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50240204 50240367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 50243719 50244459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5460 nt):
ATGGCCAGCATCACGCAGCTGTTCGACGACCTGTGTGAGGCCCTCCTGCCGGCTGCCAAGACTCACCTGG
GCCAGCGCAGTGTGAACCGGAAGAGGGCAAAGCGGAGCCTCAAGAAGGTGGCCTACAATGCTCTTTTCAC
AAATCTTTTTCAAGATGAGACTCAACAGCTGCAGCCTGACATGTCAAAACTACCAGCGAGAAACAAGATC
CTCATGTTGTCCTTTGACTTGAGAGTGGGTGGCCTGGGCCCCAAGGCCGACCGTTTGGAGGAGCTTGTGG
AGGAGCTGGAAGCAGCCCCTTGCTGTCCGCTTTTGGAGGTGGGGTCTGTTTTGGACCTCCTGGTTCAGCT
GGCAGGGAGTGGTCCCCCTCAAGTTCTGCCGAGAAAACGAGACTACTTCCTTAACAACAAGCATGTGGGG
AGAAACGTTCCGTACAGCGGCTATGATTGCGACGACCTGAGTGTGTTTGAGATGGACGTTCAGTCTCTGA
TCTCCAGAGAAGAGTGTTTGTGTCACAGCATGATCCAGGAAACACTTCAGGTTATGGAGGCTGCTCCAGG
CACTGGCCTGCCCACCGTCGGGCTCTTCTCATTTGGTGACCCTTGTGGTGACAGGTTCGAGAGAGACACC
CGGGTCTCGCTCTTCGGGGCCCTTGTGCACAGCCGCACTTATGACATGGACGTCCGACTGGGCCTGCCCC
CCGTGCCAGACAATGCGGACCTCTCTGGGCTGGCTATTAAGGTCCCACCGAGTGTGGATCAGTGGGAAGA
CGAAGGATTCCAGTCAGCGTCCAACTTGACTCCTGATTCCCAGTCTGAGCCCAGCGTGACCCCAGACGTG
GACCTGTGGGAAGCCGCACTTACCTATGAGGCCAGCAAGCGGAGGTGCTGGGAGCGAGTTGGCTGCCCCC
CTGGCCACAGAGAGGAGCCTTACCTGACGGAGGCGGGAAGGGACGCTTTCGACAAGTTCTGCAGGCTCCA
CCAAGGGGAGCTCCAGCTGCTTGCTGGGGGCGTCCTACAGGCCCCGCAGCCCGTGCTGGTGAAGGAGTGC
GAGCTGGTGAAAGACGTGCTGAACGTCTTGATTGGGGTCGTGTCTGCCACGTTTTCGCTCTGCCAGCCGG
CCCAGGCCTTTGTGGTGAAGCGGGGCGTCCACGTGTCAGGAGCGTCTCCCGAGAGCATCAGCAGCCTGCT
CTCGGAAGTGGCCGAGTATGGGACCTGCTACACGCGCCTGAGTCATTTCTCTCTGCAGCCCGTCCTGGAC
TCTTTGTACAGCAAGGGCCTCGTGTTCCAGGCCTTCACCAGTGGCCTGAGGAGGTACCTGCAGTATTACC
GGGCCTGCGTCCTTTCCACTCCGCCCACCCTGAGCCTCCTCACCATTGGTTTTCTCTTCAAGAAACTTGG
CCGGCAGCTCAGGTACCTGGCCGAGCTCTGTGGCGTTGGCGCTGTGCTCCCGGGCACCTGTGGAGGAGGC
CCCAGGGCCGCGTTTCCCACCGGCGTGAAGCTGCTGTCCTACCTCTACCAGGAGGCTCTGCACAACTGCA
GCAACGAGCACTACCCTGTACTGCTGTCCCTGCTGAAGACCAGCTGCGAGCCCTACACCCGGTTCATCCA
CGACTGGGTGTACAGCGGGGTGTTCAGAGACGCTTATGGCGAGTTCATGATTCAGGTGAACCACGAGTAC
CTCAGCTTCCGAGATAAGTTGTACTGGACACATGGCTACGTGCTCATCTCCAAAGAGGTGGAGGACTGTG
TTCCCGTGTTTCTGAAGCACATTGCCCACGACATATACGTCTGCGGAAAGACCATTAACCTGCTGAAGCT
CTGCTGCCCCCGGCATTACCTCTGTTGGTCCGACGTCCCTGTCCCCCGGATCTCGGTGATTTTCTCCCTT
GAGGAGTTGAAGGAGATTGAGAAGGACTGTGCCGTCTACGTTGGGCGCATGGAGAGGGTGGCCCGCCACA
GCTCTGTCAGCAAGGAGGAGAAGGAATTACGTATGGAAATTGCAAAACAAGAATTAATCGCTCATGCCCG
GGAAGCAGCATCCAGGGTCCTGAGTGCACTGAGTGACCGGCAGATGTCAGAACGGATGGCCTTGGATGCC
CGGAAGCGTGAGCAGTTTCAGAGGCTGAAAGAACAATTTGTGAAGGACCAGGAGCGACGCCAGGCGGCCA
GGCAGGAGGAGCTGGATGATGACTTCAGCTACGCCCGTGAACTCCGAGACAGGGAGAGAAGGCTGAAGTC
CCTGGAGGAGGAGCTGGAGAGGAAGGCGAGGCAGGCACTGGTCGACCACTACAGCAAGCTCTCTGCAGAG
GCAGCTCGTCGGGAGCAGAAGGCACTGTGGAGAATCCAGAGGCACCGACTGGAGAGTGCACGGCTTCGTT
TTCTCTTAGAAGATGAGAAACACATTCAGGAGATGCTGAAAGCAGTGTCTGAGGCTCACCAGCCCCAGGA
GCCGCCAGACGTCCTCTTGAGCGTGCACCCCCAGGTCACGTCTCCGGGCCCTGAGCACCCAGAGGGAGGC
CAAGGCTGTGATTCTGGGTCTGCAGAGCAACACTCGCCTGCCTGGGATGGCTGGAACAGGCCAGGCCTGC
TGACCCCACAGCCCCTTAAGCCTCTAGCAGTGGGGGCTGGTGGCAGGGGGCTGCAGCAGGCGGAGGGGGC
CAGACCCTTCTCTGACAGCCTCAGCATTGGAGACTTCCTACCTGTGGGCCCAGGGGCTGAGCCGTCCGTG
CAGACTGGCATGGTCCCTCTCCTGGAGGTGGCGCTGCAGACCATTAACTTGGACCTGCCCCCCTCAGCTC
CTGGGGAGGCACCCGCAGCAGCCAGCACTCAGCCCTCCAGGCCACAGGAGTACGACTTTAGTACTGTCCT
GAGGCCAGCTGTGGCCACCTCACCTGCACCAGGGCCCCTGCAGGCTGCAGAGTGCAGCTTGGGCAGCTCA
GGGCTACAGCTGTGGGAGGACAGTTGTGGGAAGATGGATGCCTGTGGCTCCGCCTCGCGGGAGACTCTGC
TCCCCTCACACCCACCCAGGCGTGCTGCTCTGGAGGAGGGGAGCAGCCAGCCCACAGAGCGGCTCTTTGG
GCAGGTGTCAGGGGGTGGTCTTCCCACAGGGGACTACGCTTCTGAAATAGCTCCCACCCGGCCACGGTGG
AACACCCACGGGCACGTGTCTGACGCCAGCATCAGGGTCGGGGAGAATGTGTCAGATGTGGCTCCCACCC
AGCCACGGTGGAACACCCACGGACACGTATCCAATGCCAGCATCAGCTTAGGGGAGTCTGTGTCAGATGT
GGCTCCCACTCGGCCACGGTGGAACATCCATGGACATGTGTCCAACGCCAGCATCAGGGTCGGGGAGAAT
GTGTCAGATGTGGCTCCCACCAGGCCACGGTGGAATACCCACGGGCACGTGTCCAACGCCAGCATCAGGG
TTGGGGAGAACGTGTCGGACGTGGCTCCCACCCGGCCACGGTGGAACACCCATGGACACGTGTCCGATGC
CAGCATCAGCTTGGGGGAGTCTGTGTCAGACATGGCTCCCGCCCGGCCACGGTGGAACACCCATGGACAC
GTGTCTGATGCCAGCATCAGCTTGGGGGAGTCTGTGTCAGACATGGCTCCCACCCGGCCACGGTGGAACA
CCCACGGACATGTGTCTGACACCAGCATCAGGGTTGGGGAGAACGTATCGGACGTGGCTCCCATCCGGTC
ACGGTGCAACACCCATGGACACGTGTCCGACGCCAGCATCAGCTTGGGGGAGCCTGTGTCGGATGTGGTT
TCCACCCGGCCACGGTGGAACACCCATGTACCCATCCCTCCGCCCCACATGGTGCTGGGGGCTCTCTCAC
CAGAAGCTGAGCCCAACACACCCAGGCCCCAACAGAGCCCCCCTGGCCACACGTCCCAGTCAGCGCTCAG
CCTGGGAGCACAGAGCACTGTGCTGGACTGTGGGCCACGGCTGCCTGTAGAAGTGGGGCCATCTCTGTCC
TCCCCCAGCTCGGGCTGCGGGGAGGGGAGCATCAGCGTGGGGGAGAACGTGTCAGACGTGGCTCCCACCC
AACCATGGTGGCCCAACACCCCGGGAGACAGTGTCTCTGAAGAACTAGGCCCTGGGAGGAGCGGGGACAC
TGAGGACCTCTCTCCAAATTGGCCTCTCAACTCACAGGAAGACACAGCTGCCCAGAGCAGCCCAGGCCGT
GGTGAGGAGGCGGAGGCATCGGCGGCGGAGGCTCAGGGTGGGGAGCAGGCCTACCTGGCAGGCCTGGCAG
GGCAGTACCACTTGGAGCGGTACCCGGACAGTTACGAGTCCATGTCCGAGCCGCCCATTGCTCATCTTTT
GCGCCCCGTGCTTCCCCGGGCCTTCGCCTTCCCCGTGGACCCCCAGGTCCAGTCTGCCGCTGATGAGACT
GCTGTGCAGCTGAGCGAGTTGCTGACGCTGCCCGTGCTCATGAAGCGCTCCATCACGGCACCGCTGGCCG
CCCACATCTCCTTGGTGAACAAGGCCGCTGTCGACTACTTCTTCGTGGAGCTGCACCTGGAGGCGCACTA
TGAGGCACTGCGGCACTTCCTGCTGATGGAGGACGGCGAGTTCGCCCAGTCCCTCAGCGACCTGCTCTTT
GAGAAGCTTGGAGCTGGGCAAACGCCCGGAGAGCTGCTCAACCCGCTGGTGCTGAACTCTGTGCTGAGCA
AGGCCCTGCAGTGCAGCCTGCATGGGGACACCCCGCACGCCTCCAACCTCTCCCTCGCTCTCAAGTACCT
GCCCGAGGTGTTTGCCCCCAACGCCCCGGATGTGCTGAGCTGCCTGGAGCTCAGGTACAAGGTGGACTGG
CCTCTCAACATTGTCATCACCGAGGGCTGCGTGAGCAAGTACAGCGGCGTCTTCTCCTTCCTGCTGCAGC
TGAAGCTCATGATGTGGGCGCTCAAGGACGTCTGCTTCCACCTCAAGCGCACAGCCCTGCTGAGCCACAT
GGCCGGCTCTGTGCAGTTCCGTCAGCTGCAGCTGTTCAAGCACGAGATGCAGCATTTCGTGAAGGTCATC
CAGGGCTACATCGCCAACCAGATCCTGCACGTCACCTGGTGCGAGTTCAGGGCCAGGTTGGCCACCGTGG
GCGACCTGGAGGAGATCCAGCGTGCGCACGCAGAGTACCTGCACAAGGCCGTCTTCAGGGGCCTGCTCAC
GGAGAAGGCGGCGCCCGTCATGAACGTCATCCACAGCATCTTCAGCCTCGTGCTCAAGTTCCGCAGCCAG
CTCATCTCCCAGGCCTGGGGGCCCCCTGGGGGCCCGCGGGGTGCAGAGCACCCCAACTTTGCACTCATGC
AGCAGTCCTACAACACCTTCAAGTACTACTCCCACTTTCTCTTCAAAGTGGTGACCAAGCTGGTGAACCG
CGGCTACCAGCCCCACCTGGAGGACTTTCTGCTGCGCATCAACTTCAACAACTACTACCAGGACGCCTGA

Translation (1819 aa):
MASITQLFDDLCEALLPAAKTHLGQRSVNRKRAKRSLKKVAYNALFTNLFQDETQQLQPDMSKLPARNKI
LMLSFDLRVGGLGPKADRLEELVEELEAAPCCPLLEVGSVLDLLVQLAGSGPPQVLPRKRDYFLNNKHVG
RNVPYSGYDCDDLSVFEMDVQSLISREECLCHSMIQETLQVMEAAPGTGLPTVGLFSFGDPCGDRFERDT
RVSLFGALVHSRTYDMDVRLGLPPVPDNADLSGLAIKVPPSVDQWEDEGFQSASNLTPDSQSEPSVTPDV
DLWEAALTYEASKRRCWERVGCPPGHREEPYLTEAGRDAFDKFCRLHQGELQLLAGGVLQAPQPVLVKEC
ELVKDVLNVLIGVVSATFSLCQPAQAFVVKRGVHVSGASPESISSLLSEVAEYGTCYTRLSHFSLQPVLD
SLYSKGLVFQAFTSGLRRYLQYYRACVLSTPPTLSLLTIGFLFKKLGRQLRYLAELCGVGAVLPGTCGGG
PRAAFPTGVKLLSYLYQEALHNCSNEHYPVLLSLLKTSCEPYTRFIHDWVYSGVFRDAYGEFMIQVNHEY
LSFRDKLYWTHGYVLISKEVEDCVPVFLKHIAHDIYVCGKTINLLKLCCPRHYLCWSDVPVPRISVIFSL
EELKEIEKDCAVYVGRMERVARHSSVSKEEKELRMEIAKQELIAHAREAASRVLSALSDRQMSERMALDA
RKREQFQRLKEQFVKDQERRQAARQEELDDDFSYARELRDRERRLKSLEEELERKARQALVDHYSKLSAE
AARREQKALWRIQRHRLESARLRFLLEDEKHIQEMLKAVSEAHQPQEPPDVLLSVHPQVTSPGPEHPEGG
QGCDSGSAEQHSPAWDGWNRPGLLTPQPLKPLAVGAGGRGLQQAEGARPFSDSLSIGDFLPVGPGAEPSV
QTGMVPLLEVALQTINLDLPPSAPGEAPAAASTQPSRPQEYDFSTVLRPAVATSPAPGPLQAAECSLGSS
GLQLWEDSCGKMDACGSASRETLLPSHPPRRAALEEGSSQPTERLFGQVSGGGLPTGDYASEIAPTRPRW
NTHGHVSDASIRVGENVSDVAPTQPRWNTHGHVSNASISLGESVSDVAPTRPRWNIHGHVSNASIRVGEN
VSDVAPTRPRWNTHGHVSNASIRVGENVSDVAPTRPRWNTHGHVSDASISLGESVSDMAPARPRWNTHGH
VSDASISLGESVSDMAPTRPRWNTHGHVSDTSIRVGENVSDVAPIRSRCNTHGHVSDASISLGEPVSDVV
STRPRWNTHVPIPPPHMVLGALSPEAEPNTPRPQQSPPGHTSQSALSLGAQSTVLDCGPRLPVEVGPSLS
SPSSGCGEGSISVGENVSDVAPTQPWWPNTPGDSVSEELGPGRSGDTEDLSPNWPLNSQEDTAAQSSPGR
GEEAEASAAEAQGGEQAYLAGLAGQYHLERYPDSYESMSEPPIAHLLRPVLPRAFAFPVDPQVQSAADET
AVQLSELLTLPVLMKRSITAPLAAHISLVNKAAVDYFFVELHLEAHYEALRHFLLMEDGEFAQSLSDLLF
EKLGAGQTPGELLNPLVLNSVLSKALQCSLHGDTPHASNLSLALKYLPEVFAPNAPDVLSCLELRYKVDW
PLNIVITEGCVSKYSGVFSFLLQLKLMMWALKDVCFHLKRTALLSHMAGSVQFRQLQLFKHEMQHFVKVI
QGYIANQILHVTWCEFRARLATVGDLEEIQRAHAEYLHKAVFRGLLTEKAAPVMNVIHSIFSLVLKFRSQ
LISQAWGPPGGPRGAEHPNFALMQQSYNTFKYYSHFLFKVVTKLVNRGYQPHLEDFLLRINFNNYYQDA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH