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Report for CCDS11268.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11268.1 Public Homo sapiens 17 COPRS 24 110 108 CCDS HistoryNCBI Gene:55352Re-query CCDS DB by CCDS ID:11268.1Re-query CCDS DB by GeneID:55352See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11268.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302362.11 ENSP00000304327.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000302362.11Link to Ensembl Protein Viewer:ENSP00000304327.6Re-query CCDS DB by Nucleotide ID:ENST00000302362Re-query CCDS DB by Protein ID:ENSP00000304327
Original member Current member NCBI NM_018405.4 NP_060875.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018405.4Link to Protein Sequence:NP_060875.2Re-query CCDS DB by Nucleotide ID:NM_018405Re-query CCDS DB by Protein ID:NP_060875Link to BLAST:NP_060875.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060875.2 184 Q9NQ92 184 100% 0 0

Chromosomal Locations for CCDS 11268.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 31852139 31852308 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31852812 31853030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31856799 31856865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31859101 31859199 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (555 nt):
ATGGACCTTCAGGCCGCCGGGGCCCAGGCGCAGGGGGCCGCGGAGCCGTCTCGGGGCCCGCCGCTGCCTA
GCGCGCGGGGGGCGCCCCCCAGCCCGGAGGCTGGCTTTGCTACAGCTGACCACTCCAGTCAGGAGAGAGA
GACTGAGAAGGCTATGGATCGACTAGCCCGTGGAACACAGAGCATTCCTAATGACAGTCCTGCCCGGGGT
GAGGGCACCCATTCTGAAGAGGAAGGCTTTGCCATGGATGAGGAGGACTCTGATGGAGAACTGAATACCT
GGGAGCTGTCAGAAGGGACAAACTGTCCACCCAAGGAACAGCCTGGCGATCTTTTTAATGAGGACTGGGA
CTCGGAGTTGAAAGCAGATCAAGGGAATCCATATGATGCTGACGACATCCAGGAGAGCATTTCTCAAGAG
CTTAAACCTTGGGTGTGCTGTGCCCCACAAGGAGACATGATCTATGACCCCAGCTGGCACCATCCGCCTC
CACTGATACCCTATTATTCCAAGATGGTCTTTGAAACAGGACAGTTTGACGATGCTGAAGATTGA

Translation (184 aa):
MDLQAAGAQAQGAAEPSRGPPLPSARGAPPSPEAGFATADHSSQERETEKAMDRLARGTQSIPNDSPARG
EGTHSEEEGFAMDEEDSDGELNTWELSEGTNCPPKEQPGDLFNEDWDSELKADQGNPYDADDIQESISQE
LKPWVCCAPQGDMIYDPSWHHPPPLIPYYSKMVFETGQFDDAED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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