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Report for CCDS48165.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
48165.1 Public Homo sapiens X APLN 24 110 108 CCDS HistoryNCBI Gene:8862Re-query CCDS DB by CCDS ID:48165.1Re-query CCDS DB by GeneID:8862See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 48165.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000429967.3 ENSP00000391800.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000429967.3Link to Ensembl Protein Viewer:ENSP00000391800.2Re-query CCDS DB by Nucleotide ID:ENST00000429967Re-query CCDS DB by Protein ID:ENSP00000391800
Original member Current member NCBI NM_017413.5 NP_059109.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017413.5Link to Protein Sequence:NP_059109.3Re-query CCDS DB by Nucleotide ID:NM_017413Re-query CCDS DB by Protein ID:NP_059109Link to BLAST:NP_059109.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_059109.3 77 Q9ULZ1 77 100% 0 0

Chromosomal Locations for CCDS 48165.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 129648626 129648792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 129654564 129654630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (234 nt):
ATGAATCTGCGGCTCTGCGTGCAGGCGCTCCTGCTGCTCTGGCTCTCCTTGACCGCGGTGTGTGGAGGGT
CCCTGATGCCGCTTCCCGATGGGAATGGGCTGGAAGACGGCAATGTCCGCCACCTGGTGCAGCCCAGAGG
GTCAAGGAATGGGCCAGGGCCCTGGCAGGGAGGTCGGAGGAAATTCCGCCGCCAGCGGCCCCGCCTCTCC
CATAAGGGACCCATGCCTTTCTGA

Translation (77 aa):
MNLRLCVQALLLLWLSLTAVCGGSLMPLPDGNGLEDGNVRHLVQPRGSRNGPGPWQGGRRKFRRQRPRLS
HKGPMPF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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