NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS1347.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1347.1 Public Homo sapiens 1 RNASEL 24 110 108 CCDS HistoryNCBI Gene:6041Re-query CCDS DB by CCDS ID:1347.1Re-query CCDS DB by GeneID:6041See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1347.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367559.7 ENSP00000356530.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000367559.7Link to Ensembl Protein Viewer:ENSP00000356530.3Re-query CCDS DB by Nucleotide ID:ENST00000367559Re-query CCDS DB by Protein ID:ENSP00000356530
Original member Current member NCBI NM_021133.4 NP_066956.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_021133.4Link to Protein Sequence:NP_066956.1Re-query CCDS DB by Nucleotide ID:NM_021133Re-query CCDS DB by Protein ID:NP_066956Link to BLAST:NP_066956.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_066956.1 741 Q05823-1 741 100% 0 0

Chromosomal Locations for CCDS 1347.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 182575392 182575578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 182576256 182576389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 182581225 182581357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 182582053 182582258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 182584081 182584166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 182585327 182586806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2226 nt):
ATGGAGAGCAGGGATCATAACAACCCCCAGGAGGGACCCACGTCCTCCAGCGGTAGAAGGGCTGCAGTGG
AA
GACAATCACTTGCTGATTAAAGCTGTTCAAAACGAAGATGTTGACCTGGTCCAGCAATTGCTGGAAGG
T
GGAGCCAATGTTAATTTCCAGGAAGAGGAAGGGGGCTGGACACCTCTGCATAACGCAGTACAAATGAGC
AGG
GAGGACATTGTGGAACTTCTGCTTCGTCATGGTGCTGACCCTGTTCTGAGGAAGAAGAATGGGGCCA
CG
CCTTTTATCCTCGCAGCGATTGCGGGGAGCGTGAAGCTGCTGAAACTTTTCCTTTCTAAAGGAGCAGA
T
GTCAATGAGTGTGATTTTTATGGCTTCACAGCCTTCATGGAAGCCGCTGTGTATGGTAAGGTCAAAGCC
CTA
AAATTCCTTTATAAGAGAGGAGCAAATGTGAATTTGAGGCGAAAGACAAAGGAGGATCAAGAGCGGC
TG
AGGAAAGGAGGGGCCACAGCTCTCATGGACGCTGCTGAAAAAGGACACGTAGAGGTCTTGAAGATTCT
C
CTTGATGAGATGGGGGCAGATGTAAACGCCTGTGACAATATGGGCAGAAATGCCTTGATCCATGCTCTC
CTG
AGCTCTGACGATAGTGATGTGGAGGCTATTACGCATCTGCTGCTGGACCATGGGGCTGATGTCAATG
TG
AGGGGAGAAAGAGGGAAGACTCCCCTGATCCTGGCAGTGGAGAAGAAGCACTTGGGTTTGGTGCAGAG
G
CTTCTGGAGCAAGAGCACATAGAGATTAATGACACAGACAGTGATGGCAAAACAGCACTGCTGCTTGCT
GTT
GAACTCAAACTGAAGAAAATCGCCGAGTTGCTGTGCAAACGTGGAGCCAGTACAGATTGTGGGGATC
TT
GTTATGACAGCGAGGCGGAATTATGACCATTCCCTTGTGAAGGTTCTTCTCTCTCATGGAGCCAAAGA
A
GATTTTCACCCTCCTGCTGAAGACTGGAAGCCTCAGAGCTCACACTGGGGGGCAGCCCTGAAGGATCTC
CAC
AGAATATACCGCCCTATGATTGGCAAACTCAAGTTCTTTATTGATGAAAAATACAAAATTGCTGATA
CT
TCAGAAGGAGGCATCTACCTGGGGTTCTATGAGAAGCAAGAAGTAGCTGTGAAGACGTTCTGTGAGGG
C
AGCCCACGTGCACAGCGGGAAGTCTCTTGTCTGCAAAGCAGCCGAGAGAACAGTCACTTGGTGACATTC
TAT
GGGAGTGAGAGCCACAGGGGCCACTTGTTTGTGTGTGTCACCCTCTGTGAGCAGACTCTGGAAGCGT
GT
TTGGATGTGCACAGAGGGGAAGATGTGGAAAATGAGGAAGATGAATTTGCCCGAAATGTCCTGTCATC
T
ATATTTAAGGCTGTTCAAGAACTACACTTGTCCTGTGGATACACCCACCAGGATCTGCAACCACAAAAC
ATC
TTAATAGATTCTAAGAAAGCTGCTCACCTGGCAGATTTTGATAAGAGCATCAAGTGGGCTGGAGATC
CA
CAGGAAGTCAAGAGAGATCTAGAGGACCTTGGACGGCTGGTCCTCTATGTGGTAAAGAAGGGAAGCAT
C
TCATTTGAGGATCTGAAAGCTCAAAGTAATGAAGAGGTGGTTCAACTTTCTCCAGATGAGGAAACTAAG
GAC
CTCATTCATCGTCTCTTCCATCCTGGGGAACATGTGAGGGACTGTCTGAGTGACCTGCTGGGTCATC
CC
TTCTTTTGGACTTGGGAGAGCCGCTATAGGACGCTTCGGAATGTGGGAAATGAATCCGACATCAAAAC
A
CGAAAATCTGAAAGTGAGATCCTCAGACTACTGCAACCTGGGCCTTCTGAACATTCCAAAAGTTTTGAC
AAG
TGGACGACTAAGATTAATGAATGTGTTATGAAAAAAATGAATAAGTTTTATGAAAAAAGAGGCAATT
TC
TACCAGAACACTGTGGGTGATCTGCTAAAGTTCATCCGGAATTTGGGAGAACACATTGATGAAGAAAA
G
CATAAAAAGATGAAATTAAAAATTGGAGACCCTTCCCTGTATTTTCAGAAGACATTTCCAGATCTGGTG
ATC
TATGTCTACACAAAACTACAGAACACAGAATATAGAAAGCATTTCCCCCAAACCCACAGTCCAAACA
AG
CCTCAGTGTGATGGAGCTGGTGGGGCCAGTGGGTTGGCCAGCCCTGGGTGCTGA


Translation (741 aa):
MESRDHNNPQEGPTSSSGRRAAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMS
R
EDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKA
L
KFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHAL
L
SSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLA
V
ELKLKKIAELLCKRGASTDCGDLVMTARRNYDHSLVKVLLSHGAKEDFHPPAEDWKPQSSHWGAALKDL
H
RIYRPMIGKLKFFIDEKYKIADTSEGGIYLGFYEKQEVAVKTFCEGSPRAQREVSCLQSSRENSHLVTF
Y
GSESHRGHLFVCVTLCEQTLEACLDVHRGEDVENEEDEFARNVLSSIFKAVQELHLSCGYTHQDLQPQN
I
LI
DSKKAAHLADFDKSIKWAGDPQEVKRDLEDLGRLVLYVVKKGSISFEDLKAQSNEEVVQLSPDEETK
D
LIHRLFHPGEHVRDCLSDLLGHPFFWTWE
SRYRTLRNVGNESDIKTRKSESEILRLLQPGPSEHSKSFD
K
WTTK
INECVMKKMNKFYEKRGNFYQNTVGDLLKFIRNLGEHIDEEKHKKMKLKIGDPSLYFQKTFPDLV
I
YVYTKLQNTEYRKHFPQTHSPNKPQCDGAGGASGLASPGC




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser