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Report for CCDS44559.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44559.1 Public Homo sapiens 11 METTL15 24 110 108 CCDS HistoryNCBI Gene:196074Re-query CCDS DB by CCDS ID:44559.1Re-query CCDS DB by GeneID:196074See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44559.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000407364.8 ENSP00000384369.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000407364.8Link to Ensembl Protein Viewer:ENSP00000384369.3Re-query CCDS DB by Nucleotide ID:ENST00000407364Re-query CCDS DB by Protein ID:ENSP00000384369
Original member Current member NCBI NM_001113528.2 NP_001107000.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001113528.2Link to Protein Sequence:NP_001107000.1Re-query CCDS DB by Nucleotide ID:NM_001113528Re-query CCDS DB by Protein ID:NP_001107000Link to BLAST:NP_001107000.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001107000.1 407 A6NJ78-1 407 100% 0 0

Chromosomal Locations for CCDS 44559.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 28113335 28113604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 28211062 28211198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 28290206 28290397 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 28296753 28296931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 28330396 28330841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1224 nt):
ATGCTTCGGTATCCATATTTTTGTAGAATGTATAAAGAATGCCTTTCATGTTGGTTGGAATCTGGCATAC
CTAATTTAGGTGTCTGGCCAAACAGAATACATACTACAGCAGAAAAATATAGAGAATATGAAGCCCGGGA
GCAAACAGATCAAACTCAAGCCCAGGAGTTACACAGATCTCAAGATAGAGATTTTGAAACTATGGCTAAA
TTACATATTCCAGTAATGGTGGATGAAGTTGTTCATTGTTTGTCACCACAAAAAGGACAGATTTTTCTAG
ATATGACATTTGGTTCGGGAGGGCACACAAAAGCCATTCTGCAGAAGGAGTCAGATATTGTTCTCTATGC
CTTGGACAGAGACCCAACAGCTTATGCATTAGCTGAACATCTTTCAGAGTTGTATCCTAAACAAATCCGA
GCTATGCTGGGCCAGTTCAGCCAGGCAGAAGCCTTATTAATGAAAGCTGGAGTGCAGCCAGGAACTTTTG
ATGGAGTTCTTATGGATCTTGGGTGTTCCTCCATGCAACTTGATACTCCTGAAAGAGGTTTTTCCCTTCG
GAAAGATGGCCCTTTGGACATGAGAATGGATGGTGGCAGGTACCCTGACATGCCCACTGCTGCTGATGTT
GTGAATGCTTTAGATCAACAGGCACTTGCATCTATCCTAAGAACATACGGGGAGGAGAAGCATGCCAAGA
AAATCGCTTCAGCAATTGTTCAGGCACGCAGCATCTACCCCATCACCAGAACCCAGCAGCTTGCCAGCAT
CGTTGCAGGAGCATTTCCTCCCTCTGCTATTTATACACGGAAAGACTTACTACAGCGATCTACCCATATT
GCCACCAAGACTTTCCAGGCTCTTCGCATATTTGTGAACAATGAGCTCAATGAACTCTACACGGGACTGA
AGACAGCTCAGAAGTTTCTGAGACCTGGTGGTCGTCTTGTTGCCCTCTCCTTCCATTCACTAGAGGATCG
CATCGTCAAAAGATTTTTGCTTGGAATAAGCATGACAGAAAGATTTAACCTAAGTGTTAGACAACAAGTG
ATGAAAACATCTCAATTGGGTTCAGATCACGAAAACACGGAAGAAGTCTCTATGAGAAGAGCTCCTTTAA
TGTGGGAATTGATACACAAGAAGGTACTTAGTCCACAAGATCAGGATGTACAAGATAACCCCAGAGGGCG
CTCAGCCAAGCTTAGAGCAGCTATCAAATTATAA

Translation (407 aa):
MLRYPYFCRMYKECLSCWLESGIPNLGVWPNRIHTTAEKYREYEAREQTDQTQAQELHRSQDRDFETMAK
LHIPVMVDEVVHCLSPQKGQIFLDMTFGSGGHTKAILQKESDIVLYALDRDPTAYALAEHLSELYPKQIR
AMLGQFSQAEALLMKAGVQPGTFDGVLMDLGCSSMQLDTPERGFSLRKDGPLDMRMDGGRYPDMPTAADV
VNALDQQALASILRTYGEEKHAKKIASAIVQARSIYPITRTQQLASIVAGAFPPSAIYTRKDLLQRSTHI
ATKTFQALRIFVNNELNELYTGLKTAQKFLRPGGRLVALSFHSLEDRIVKRFLLGISMTERFNLSVRQQV
MKTSQLGSDHENTEEVSMRRAPLMWELIHKKVLSPQDQDVQDNPRGRSAKLRAAIKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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