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Report for CCDS13503.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13503.1 Public Homo sapiens 20 MRGBP 24 110 108 CCDS HistoryNCBI Gene:55257Re-query CCDS DB by CCDS ID:13503.1Re-query CCDS DB by GeneID:55257See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13503.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370487.5 ENSP00000359518.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370487.5Link to Ensembl Protein Viewer:ENSP00000359518.3Re-query CCDS DB by Nucleotide ID:ENST00000370487Re-query CCDS DB by Protein ID:ENSP00000359518
Original member Current member NCBI NM_018270.6 NP_060740.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018270.6Link to Protein Sequence:NP_060740.1Re-query CCDS DB by Nucleotide ID:NM_018270Re-query CCDS DB by Protein ID:NP_060740Link to BLAST:NP_060740.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060740.1 204 Q9NV56 204 100% 0 0

Chromosomal Locations for CCDS 13503.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 62796524 62796671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62797110 62797231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62798587 62798668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62798975 62799049 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 62799456 62799643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (615 nt):
ATGGGAGAGGCCGAGGTGGGCGGCGGGGGCGCCGCAGGCGACAAGGGCCCGGGGGAGGCGGCCACCAGCC
CGGCGGAGGAGACAGTGGTGTGGAGCCCCGAGGTGGAGGTGTGCCTCTTCCACGCCATGCTGGGCCACAA
GCCCGTCGGTGTGAACCGACACTTCCACATGATTTGTATTCGGGACAAGTTCAGCCAGAACATCGGGCGG
CAGGTCCCATCCAAGGTCATCTGGGACCATCTGAGCACCATGTACGACATGCAGGCGCTGCATGAGTCTG
AGATTCTTCCATTCCCGAATCCAGAGAGGAACTTCGTCCTTCCAGAAGAGATCATTCAGGAGGTCCGAGA
AGGAAAAGTGATGATAGAAGAGGAGATGAAAGAGGAGATGAAGGAAGACGTGGACCCCCACAATGGGGCT
GACGATGTTTTTTCATCTTCAGGGAGTTTGGGGAAAGCATCAGAAAAATCCAGCAAAGACAAAGAGAAGA
ACTCCTCAGACTTGGGGTGCAAAGAAGGCGCAGACAAGCGGAAGCGCAGCCGGGTCACCGACAAAGTCCT
GACCGCAAACAGCAACCCTTCCAGTCCCAGTGCTGCCAAGCGGCGCCGCACGTAG

Translation (204 aa):
MGEAEVGGGGAAGDKGPGEAATSPAEETVVWSPEVEVCLFHAMLGHKPVGVNRHFHMICIRDKFSQNIGR
QVPSKVIWDHLSTMYDMQALHESEILPFPNPERNFVLPEEIIQEVREGKVMIEEEMKEEMKEDVDPHNGA
DDVFSSSGSLGKASEKSSKDKEKNSSDLGCKEGADKRKRSRVTDKVLTANSNPSSPSAAKRRRT


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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