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Report for CCDS9719.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9719.1 Public Homo sapiens 14 CGRRF1 24 110 108 CCDS HistoryNCBI Gene:10668Re-query CCDS DB by CCDS ID:9719.1Re-query CCDS DB by GeneID:10668See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9719.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216420.12 ENSP00000216420.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000216420.12Link to Ensembl Protein Viewer:ENSP00000216420.7Re-query CCDS DB by Nucleotide ID:ENST00000216420Re-query CCDS DB by Protein ID:ENSP00000216420
Original member Current member NCBI NM_006568.3 NP_006559.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006568.3Link to Protein Sequence:NP_006559.1Re-query CCDS DB by Nucleotide ID:NM_006568Re-query CCDS DB by Protein ID:NP_006559Link to BLAST:NP_006559.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006559.1 332 Q99675 332 100% 0 0

Chromosomal Locations for CCDS 9719.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 54509960 54510063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54522454 54522593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54530049 54530226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54530903 54531050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54537722 54537829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 54538063 54538383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (999 nt):
ATGGCTGCGGTGTTTCTGGTAACGCTTTATGAATACTCGCCGCTTTTCTACATCGCGGTGGTCTTTACCT
GCTTCATCGTGACCACCGGCCTGGTATTGGGATGGTTTGGTTGGGATGTTCCAGTAATTCTGAGAAATTC
AGAAGAGACCCAGTTCAGCACAAGAGTTTTCAAAAAGCAAATGAGACAAGTCAAGAATCCTTTTGGCTTA
GAGATCACTAATCCATCTTCAGCTTCAATTACAACTGGCATAACCTTGACAACAGATTGCCTTGAAGATA
GCCTCCTTACATGCTACTGGGGGTGCAGTGTTCAAAAATTATATGAAGCTCTGCAGAAGCATGTTTATTG
CTTCAGAATAAGCACTCCCCAAGCATTAGAAGATGCTCTGTATAGTGAATATCTCTATCAGGAACAGTAT
TTTATTAAAAAGGATAGCAAAGAAGAAATATATTGCCAGTTACCAAGAGATACTAAAATTGAAGACTTTG
GTACAGTACCCAGATCTCGCTATCCATTGGTAGCGCTATTGACCTTAGCTGATGAGGATGACCGGGAAAT
TTATGATATTATTTCCATGGTGTCAGTGATTCATATTCCTGATAGGACTTATAAACTATCCTGCAGAATA
TTGTATCAATATTTACTCTTGGCTCAAGGTCAATTTCATGATCTTAAGCAACTTTTCATGTCTGCAAATA
ATAATTTCACTCCCTCCAACAATTCCTCTTCAGAAGAAAAAAACACAGACAGAAGTTTGTTGGAAAAGGT
GGGACTCTCTGAAAGTGAAGTTGAGCCATCGGAAGAGAACAGCAAGGACTGTGTTGTTTGCCAGAATGGG
ACTGTGAACTGGGTACTCTTACCATGCAGACACACATGCCTGTGTGATGGCTGTGTGAAGTATTTTCAGC
AGTGCCCAATGTGCAGGCAGTTTGTTCAGGAATCTTTTGCACTTTGCAGTCAAAAAGAGCAAGATAAAGA
CAAACCGAAGACTCTTTGA

Translation (332 aa):
MAAVFLVTLYEYSPLFYIAVVFTCFIVTTGLVLGWFGWDVPVILRNSEETQFSTRVFKKQMRQVKNPFGL
EITNPSSASITTGITLTTDCLEDSLLTCYWGCSVQKLYEALQKHVYCFRISTPQALEDALYSEYLYQEQY
FIKKDSKEEIYCQLPRDTKIEDFGTVPRSRYPLVALLTLADEDDREIYDIISMVSVIHIPDRTYKLSCRI
LYQYLLLAQGQFHDLKQLFMSANNNFTPSNNSSSEEKNTDRSLLEKVGLSESEVEPSEENSKDCVVCQNG
TVNWVLLPCRHTCLCDGCVKYFQQCPMCRQFVQESFALCSQKEQDKDKPKTL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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