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Report for CCDS46465.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46465.1 Public Homo sapiens 2 CWC22 24 110 108 CCDS HistoryNCBI Gene:57703Re-query CCDS DB by CCDS ID:46465.1Re-query CCDS DB by GeneID:57703See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46465.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000410053.8 ENSP00000387006.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000410053.8Link to Ensembl Protein Viewer:ENSP00000387006.3Re-query CCDS DB by Nucleotide ID:ENST00000410053Re-query CCDS DB by Protein ID:ENSP00000387006
Original member Current member NCBI NM_001376029.1 NP_001362958.1 Accepted alive Link to Nucleotide Sequence:NM_001376029.1Link to Protein Sequence:NP_001362958.1Re-query CCDS DB by Nucleotide ID:NM_001376029Re-query CCDS DB by Protein ID:NP_001362958Link to BLAST:NP_001362958.1
Original member Current member NCBI NM_001376030.1 NP_001362959.1 Accepted alive Link to Nucleotide Sequence:NM_001376030.1Link to Protein Sequence:NP_001362959.1Re-query CCDS DB by Nucleotide ID:NM_001376030Re-query CCDS DB by Protein ID:NP_001362959Link to BLAST:NP_001362959.1
Original member Current member NCBI NM_020943.3 NP_065994.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_020943.3Link to Protein Sequence:NP_065994.1Re-query CCDS DB by Nucleotide ID:NM_020943Re-query CCDS DB by Protein ID:NP_065994Link to BLAST:NP_065994.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001362958.1 908 Q9HCG8 908 100% 0 0
NP_001362959.1 908 Q9HCG8 908 100% 0 0
NP_065994.1 908 Q9HCG8 908 100% 0 0

Chromosomal Locations for CCDS 46465.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 179945129 179945715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179950512 179950732 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179950825 179950926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179952471 179952598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179954205 179954357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179954957 179955034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179959022 179959082 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179964547 179964628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179965878 179965982 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179970501 179970563 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179970650 179970856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179970941 179971076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179973193 179973246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179973634 179973802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179978190 179978318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179981752 179981997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179986695 179986805 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179988577 179988644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 179993315 179993341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2727 nt):
ATGAAAAGTAGTGTGGCACAGATAAAACCTTCTTCTGGTCATGACAGAAGGGAAAACCTTAATTCATATC
AGAGGAACTCCTCTCCAGAAGACAGATATGAAGAACAAGAACGATCCCCCCGGGATAGAGATTACTTTGA
TTACAGCAGATCAGACTATGAGCATTCAAGAAGAGGACGTTCTTATGATAGTAGCATGGAGTCACGAAAC
AGGGACCGAGAAAAACGCAGAGAAAGAGAAAGAGATACGGATCGGAAAAGGTCTCGGAAATCCCCATCTC
CTGGGAGGAGAAACCCAGAAACATCAGTAACTCAGAGTTCCTCTGCTCAGGATGAACCTGCTACAAAGAA
AAAGAAAGATGAGCTGGATCCTCTTCTTACTCGCACTGGTGGAGCATATATTCCCCCTGCAAAGCTCAGG
ATGATGCAGGAACAGATTACAGATAAAAACAGCTTAGCATACCAGAGGATGAGTTGGGAGGCCCTGAAGA
AGTCAATTAATGGCCTTATCAACAAAGTCAACATTTCCAACATAAGTATTATTATTCAAGAGCTTCTTCA
AGAAAATATAGTTAGAGGAAGAGGACTGCTGTCCAGGTCTGTTTTGCAAGCACAGAGTGCTTCTCCAATC
TTCACCCATGTTTATGCAGCATTAGTGGCAATTATCAACTCAAAATTTCCACAAATTGGAGAATTAATCC
TCAAAAGGTTAATTCTTAATTTTCGAAAAGGCTATCGAAGAAATGACAAGCAACTTTGCCTGACTGCTTC
AAAATTTGTGGCGCATCTTATTAACCAAAATGTGGCACACGAAGTATTATGCTTAGAGATGCTCACTTTG
CTCCTGGAAAGACCAACAGATGATAGCGTTGAAGTAGCTATTGGTTTTCTTAAGGAATGTGGCCTCAAAT
TAACACAAGTGTCACCAAGAGGAATCAATGCTATATTTGAACGCCTTCGAAACATTCTGCATGAGTCTGA
AATTGACAAAAGAGTTCAATATATGATTGAAGTGATGTTTGCTGTACGGAAAGATGGATTCAAGGACCAC
CCCATTATCCTAGAAGGTCTTGATTTGGTGGAAGAAGATGATCAATTCACTCATATGCTCCCTCTGGAGG
ATGACTATAATCCAGAAGATGTTCTTAATGTTTTCAAGATGGATCCTAATTTTATGGAGAATGAAGAGAA
GTACAAAGCTATTAAGAAAGAAATTCTTGATGAGGGAGATACTGACTCGAACACAGACCAGGATGCTGGG
AGTAGTGAAGAGGACGAGGAAGAAGAAGAGGAAGAGGGAGAAGAAGATGAAGAAGGACAAAAAGTAACTA
TTCATGACAAAACAGAAATTAACCTGGTCTCATTTCGTCGTACAATTTATCTTGCTATTCAGTCAAGTTT
AGATTTTGAAGAATGTGCTCACAAATTGCTGAAAATGGAGTTTCCTGAAAGCCAAACAAAAGAACTCTGC
AACATGATACTTGATTGCTGTGCCCAACAGAGGACATACGAAAAATTTTTTGGCTTATTAGCTGGGCGAT
TTTGCATGCTAAAGAAAGAGTACATGGAATCCTTTGAAGGTATATTCAAAGAACAGTATGATACCATCCA
TCGCTTGGAAACAAACAAGTTGCGAAATGTTGCTAAGATGTTTGCTCACCTTTTATACACTGATTCACTT
CCATGGAGTGTTCTTGAATGTATAAAACTGAGTGAAGAAACCACTACATCATCCAGTAGAATTTTTGTCA
AAATATTTTTCCAGGAACTGTGTGAATACATGGGTCTTCCTAAACTTAATGCAAGATTAAAGGATGAAAC
TCTGCAGCCATTCTTTGAAGGATTATTACCCCGAGATAATCCAAGAAACACTCGGTTTGCCATCAACTTC
TTTACTTCTATAGGTCTTGGAGGTTTAACGGATGAACTGCGGGAGCATCTCAAAAATACACCAAAGGTCA
TTGTGGCGCAGAAACCAGATGTTGAGCAAAATAAATCCTCCCCATCCTCTTCCTCTTCAGCGTCCTCCTC
TTCAGAGTCTGACTCATCCGACTCTGATTCTGACAGCAGTGATAGCAGTTCAGAGTCTTCCAGTGAAGAG
AGCGACTCTTCATCCATCAGTAGTCATAGCTCTGCCTCAGCTAATGATGTAAGAAAGAAGGGACATGGGA
AGACCAGAAGTAAAGAGGTAGATAAATTGATCAGAAACCAGCAAACAAATGATAGGAAACAAAAAGAAAG
AAGACAAGAACACGGGCACCAGGAAACAAGGACTGAGAGAGAAAGAAGGTCAGAAAAACACAGAGATCAA
AATTCAAGTGGTTCAAATTGGAGAGATCCTATAACAAAGTACACATCAGACAAAGATGTTCCTTCTGAAC
GAAATAACTACAGTAGAGTTGCGAATGACAGAGACCAAGAAATGCATATAGATTTGGAAAATAAGCATGG
TGATCCCAAAAAGAAGAGAGGAGAGAGAAGAAATTCTTTTTCTGAAAATGAGAAGCATACACACCGAATT
AAAGACAGTGAAAATTTCAGAAGAAAAGATAGATCAAAGTCAAAGGAAATGAATAGAAAGCACTCAGGCT
CAAGAAGTGATGAAGATAGATATCAAAATGGTGCCGAGAGACGATGGGAAAAATCTAGCAGATACTCTGA
ACAATCCAGAGAATCAAAGAAAAATCAGGACCGGCGAAGAGAAAAGTCTCCAGCAAAACAAAAATAA

Translation (908 aa):
MKSSVAQIKPSSGHDRRENLNSYQRNSSPEDRYEEQERSPRDRDYFDYSRSDYEHSRRGRSYDSSMESRN
RDREKRRERERDTDRKRSRKSPSPGRRNPETSVTQSSSAQDEPATKKKKDELDPLLTRTGGAYIPPAKLR
MMQEQITDKNSLAYQRMSWEALKKSINGLINKVNISNISIIIQELLQENIVRGRGLLSRSVLQAQSASPI
FTHVYAALVAIINSKFPQIGELILKRLILNFRKGYRRNDKQLCLTASKFVAHLINQNVAHEVLCLEMLTL
LLERPTDDSVEVAIGFLKECGLKLTQVSPRGINAIFERLRNILHESEIDKRVQYMIEVMFAVRKDGFKDH
PIILEGLDLVEEDDQFTHMLPLEDDYNPEDVLNVFKMDPNFMENEEKYKAIKKEILDEGDTDSNTDQDAG
SSEEDEEEEEEEGEEDEEGQKVTIHDKTEINLVSFRRTIYLAIQSSLDFEECAHKLLKMEFPESQTKELC
NMILDCCAQQRTYEKFFGLLAGRFCMLKKEYMESFEGIFKEQYDTIHRLETNKLRNVAKMFAHLLYTDSL
PWSVLECIKLSEETTTSSSRIFVKIFFQELCEYMGLPKLNARLKDETLQPFFEGLLPRDNPRNTRFAINF
FTSIGLGGLTDELREHLKNTPKVIVAQKPDVEQNKSSPSSSSSASSSSESDSSDSDSDSSDSSSESSSEE
SDSSSISSHSSASANDVRKKGHGKTRSKEVDKLIRNQQTNDRKQKERRQEHGHQETRTERERRSEKHRDQ
NSSGSNWRDPITKYTSDKDVPSERNNYSRVANDRDQEMHIDLENKHGDPKKKRGERRNSFSENEKHTHRI
KDSENFRRKDRSKSKEMNRKHSGSRSDEDRYQNGAERRWEKSSRYSEQSRESKKNQDRRREKSPAKQK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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