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Report for CCDS47004.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47004.1 Public Homo sapiens 4 ADRA2C 24 110 108 CCDS HistoryNCBI Gene:152Re-query CCDS DB by CCDS ID:47004.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47004.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000330055.7 ENSP00000386069.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000330055.7Link to Ensembl Protein Viewer:ENSP00000386069.2Re-query CCDS DB by Nucleotide ID:ENST00000330055Re-query CCDS DB by Protein ID:ENSP00000386069
Original member Current member NCBI NM_000683.4 NP_000674.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000683.4Link to Protein Sequence:NP_000674.2Re-query CCDS DB by Nucleotide ID:NM_000683Re-query CCDS DB by Protein ID:NP_000674Link to BLAST:NP_000674.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000674.2 462 P18825 462 100% 0 0

Chromosomal Locations for CCDS 47004.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 3766607 3767995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1389 nt):
ATGGCGTCCCCGGCGCTGGCGGCGGCGCTGGCGGTGGCGGCAGCGGCGGGCCCCAATGCGAGCGGCGCGG
GCGAGAGGGGCAGCGGCGGGGTTGCCAATGCCTCGGGGGCTTCCTGGGGGCCGCCGCGCGGCCAGTACTC
GGCGGGCGCGGTGGCAGGGCTGGCTGCCGTGGTGGGCTTCCTCATCGTCTTCACCGTGGTGGGCAACGTG
CTGGTGGTGATCGCCGTGCTGACCAGCCGGGCGCTGCGCGCGCCACAGAACCTCTTCCTGGTGTCGCTGG
CCTCGGCCGACATCCTGGTGGCCACGCTGGTCATGCCCTTCTCGTTGGCCAACGAGCTCATGGCCTACTG
GTACTTCGGGCAGGTGTGGTGCGGCGTGTACCTGGCGCTCGATGTGCTGTTTTGCACCTCGTCGATCGTG
CATCTGTGTGCCATCAGCCTGGACCGCTACTGGTCGGTGACGCAGGCCGTCGAGTACAACCTGAAGCGCA
CACCACGCCGCGTCAAGGCCACCATCGTGGCCGTGTGGCTCATCTCGGCCGTCATCTCCTTCCCGCCGCT
GGTCTCGCTCTACCGCCAGCCCGACGGCGCCGCCTACCCGCAGTGCGGCCTCAACGACGAGACCTGGTAC
ATCCTGTCCTCCTGCATCGGCTCCTTCTTCGCGCCCTGCCTCATCATGGGCCTGGTCTACGCGCGCATCT
ACCGAGTGGCCAAGCTGCGCACGCGCACGCTCAGCGAGAAGCGCGCCCCCGTGGGCCCCGACGGTGCGTC
CCCGACTACCGAAAACGGGCTGGGCGCGGCGGCAGGCGCAGGCGAGAACGGGCACTGCGCGCCCCCGCCC
GCCGACGTGGAGCCGGACGAGAGCAGCGCAGCGGCCGAGAGGCGGCGGCGCCGGGGCGCGTTGCGGCGGG
GCGGGCGGCGGCGAGCGGGCGCGGAGGGGGGCGCGGGCGGTGCGGACGGGCAGGGGGCGGGGCCGGGGGC
GGCTGAGTCGGGGGCGCTGACCGCCTCCAGGTCCCCGGGGCCCGGTGGCCGCCTGTCGCGCGCCAGCTCG
CGCTCCGTCGAGTTCTTCCTGTCGCGCCGGCGCCGGGCGCGCAGCAGCGTGTGCCGCCGCAAGGTGGCCC
AGGCGCGCGAGAAGCGCTTCACCTTTGTGCTGGCTGTGGTCATGGGCGTGTTCGTGCTCTGCTGGTTCCC
CTTCTTCTTCAGCTACAGCCTGTACGGCATCTGCCGCGAGGCCTGCCAGGTGCCCGGCCCGCTCTTCAAG
TTCTTCTTCTGGATCGGCTACTGCAACAGCTCGCTCAACCCGGTCATCTACACGGTCTTCAACCAGGATT
TCCGGCGATCCTTTAAGCACATCCTCTTCCGACGGAGGAGAAGGGGCTTCAGGCAGTGA

Translation (462 aa):
MASPALAAALAVAAAAGPNASGAGERGSGGVANASGASWGPPRGQYSAGAVAGLAAVVGFLIVFTVVGNV
LVVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV
HLCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGLNDETWY
ILSSCIGSFFAPCLIMGLVYARIYRVAKLRTRTLSEKRAPVGPDGASPTTENGLGAAAGAGENGHCAPPP
ADVEPDESSAAAERRRRRGALRRGGRRRAGAEGGAGGADGQGAGPGAAESGALTASRSPGPGGRLSRASS
RSVEFFLSRRRRARSSVCRRKVAQAREKRFTFVLAVVMGVFVLCWFPFFFSYSLYGICREACQVPGPLFK
FFFWIGYCNSSLNPVIYTVFNQDFRRSFKHILFRRRRRGFRQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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