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Report for CCDS47004.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47004.1 Public Homo sapiens 4 ADRA2C 24 110 108 CCDS HistoryNCBI Gene:152Re-query CCDS DB by CCDS ID:47004.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47004.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000330055.7 ENSP00000386069.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000330055.7Link to Ensembl Protein Viewer:ENSP00000386069.2Re-query CCDS DB by Nucleotide ID:ENST00000330055Re-query CCDS DB by Protein ID:ENSP00000386069
Original member Current member NCBI NM_000683.4 NP_000674.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_000683.4Link to Protein Sequence:NP_000674.2Re-query CCDS DB by Nucleotide ID:NM_000683Re-query CCDS DB by Protein ID:NP_000674Link to BLAST:NP_000674.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_000674.2 462 P18825 462 100% 0 0

Chromosomal Locations for CCDS 47004.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 3766607 3767995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1389 nt):
ATGGCGTCCCCGGCGCTGGCGGCGGCGCTGGCGGTGGCGGCAGCGGCGGGCCCCAATGCGAGCGGCGCGG
GC
GAGAGGGGCAGCGGCGGGGTTGCCAATGCCTCGGGGGCTTCCTGGGGGCCGCCGCGCGGCCAGTACTC
G
GCGGGCGCGGTGGCAGGGCTGGCTGCCGTGGTGGGCTTCCTCATCGTCTTCACCGTGGTGGGCAACGTG
CTG
GTGGTGATCGCCGTGCTGACCAGCCGGGCGCTGCGCGCGCCACAGAACCTCTTCCTGGTGTCGCTGG
CC
TCGGCCGACATCCTGGTGGCCACGCTGGTCATGCCCTTCTCGTTGGCCAACGAGCTCATGGCCTACTG
G
TACTTCGGGCAGGTGTGGTGCGGCGTGTACCTGGCGCTCGATGTGCTGTTTTGCACCTCGTCGATCGTG
CAT
CTGTGTGCCATCAGCCTGGACCGCTACTGGTCGGTGACGCAGGCCGTCGAGTACAACCTGAAGCGCA
CA
CCACGCCGCGTCAAGGCCACCATCGTGGCCGTGTGGCTCATCTCGGCCGTCATCTCCTTCCCGCCGCT
G
GTCTCGCTCTACCGCCAGCCCGACGGCGCCGCCTACCCGCAGTGCGGCCTCAACGACGAGACCTGGTAC
ATC
CTGTCCTCCTGCATCGGCTCCTTCTTCGCGCCCTGCCTCATCATGGGCCTGGTCTACGCGCGCATCT
AC
CGAGTGGCCAAGCTGCGCACGCGCACGCTCAGCGAGAAGCGCGCCCCCGTGGGCCCCGACGGTGCGTC
C
CCGACTACCGAAAACGGGCTGGGCGCGGCGGCAGGCGCAGGCGAGAACGGGCACTGCGCGCCCCCGCCC
GCC
GACGTGGAGCCGGACGAGAGCAGCGCAGCGGCCGAGAGGCGGCGGCGCCGGGGCGCGTTGCGGCGGG
GC
GGGCGGCGGCGAGCGGGCGCGGAGGGGGGCGCGGGCGGTGCGGACGGGCAGGGGGCGGGGCCGGGGGC
G
GCTGAGTCGGGGGCGCTGACCGCCTCCAGGTCCCCGGGGCCCGGTGGCCGCCTGTCGCGCGCCAGCTCG
CGC
TCCGTCGAGTTCTTCCTGTCGCGCCGGCGCCGGGCGCGCAGCAGCGTGTGCCGCCGCAAGGTGGCCC
AG
GCGCGCGAGAAGCGCTTCACCTTTGTGCTGGCTGTGGTCATGGGCGTGTTCGTGCTCTGCTGGTTCCC
C
TTCTTCTTCAGCTACAGCCTGTACGGCATCTGCCGCGAGGCCTGCCAGGTGCCCGGCCCGCTCTTCAAG
TTC
TTCTTCTGGATCGGCTACTGCAACAGCTCGCTCAACCCGGTCATCTACACGGTCTTCAACCAGGATT
TC
CGGCGATCCTTTAAGCACATCCTCTTCCGACGGAGGAGAAGGGGCTTCAGGCAGTGA


Translation (462 aa):
MASPALAAALAVAAAAGPNASGAGERGSGGVANASGASWGPPRGQYSAGAVAGLAAVVGFLIVFTVVGNV
L
VVIAVLTSRALRAPQNLFLVSLASADILVATLVMPFSLANELMAYWYFGQVWCGVYLALDVLFCTSSIV
H
LCAISLDRYWSVTQAVEYNLKRTPRRVKATIVAVWLISAVISFPPLVSLYRQPDGAAYPQCGLNDETWY
I
LSSCIGSFFAPCLIMGLVYARIYRVAKLRTRTLSEKRAPVGPDGASPTTENGLGAAAGAGENGHCAPPP
A
DVEPDESSAAAERRRRRGALRRGGRRRAGAEGGAGGADGQGAGPGAAESGALTASRSPGPGGRLSRASS
R
SVEFFLSRRRRARSSVCRRKVAQAREKRFTFVLAVVMGVFVLCWFPFFFSYSLYGICREACQVPGPLFK
F
FFWIGYCNSSLNPVIYTVFNQDFRRSFKHILFRRRRRGFRQ




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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