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Report for CCDS5796.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5796.1 Public Homo sapiens 7 GCC1 24 110 108 CCDS HistoryNCBI Gene:79571Re-query CCDS DB by CCDS ID:5796.1Re-query CCDS DB by GeneID:79571See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5796.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000321407.3 ENSP00000318821.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000321407.3Link to Ensembl Protein Viewer:ENSP00000318821.2Re-query CCDS DB by Nucleotide ID:ENST00000321407Re-query CCDS DB by Protein ID:ENSP00000318821
Original member Current member NCBI NM_024523.6 NP_078799.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024523.6Link to Protein Sequence:NP_078799.2Re-query CCDS DB by Nucleotide ID:NM_024523Re-query CCDS DB by Protein ID:NP_078799Link to BLAST:NP_078799.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078799.2 775 Q96CN9 775 100% 0 0

Chromosomal Locations for CCDS 5796.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 127582014 127583309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127584151 127585182 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2328 nt):
ATGGAGAAGTTTGGGATGAATTTCGGGGGCGGCCCGAGCAAGAAGGACTTGCTGGAGACTATAGAGACCC
AGAAGAAGCAGCTTCTCCAGTACCAGGCACGGCTCAAGGATGTGGTCCGTGCCTATAAAAGCCTGCTGAA
GGAGAAAGAGGCATTAGAGGCCAGCATCAAGGTGCTGTCGGTATCCCACGAGGCAGATGTGGGCCTCGCA
GGTGTCCAGCTTCCAGGCCTCACCTTTCCTGACTCTGTGGATGACCGGTGCTCCACTCACAGCGAGGATA
GCACTGGGACCGCCACTAGCTTGGATACTGCGGCCAGTCTCACCAGCACCAAGGGTGAGTTTGGGGTAGA
AGATGACAGACCGGCCCGTGGACCACCACCTCCAAAGTCCGAAGAGGCCAGTTGGTCCGAGAGTGGCGTT
AGCAGTAGCAGTGGGGATGGGCCATTTGCAGGTGGGGAGGTGGACAAAAGACTGCACCAGCTGAAGACTC
AGTTGGCTACTTTGACCAGTTCTTTGGCTACAGTCACTCAGGAGAAGTCCCGCATGGAGGCTTCTTACTT
GGCTGACAAGAAAAAGATGAAACAGGACTTAGAGGATGCCAGTAACAAGGCGGAGGAGGAGAGGGCCCGC
CTGGAGGGAGAATTGAAGGGGCTGCAGGAGCAAATAGCAGAAACCAAAGCCCGGCTTATCACGCAGCAGC
ATGATCGGGCCCAAGAGCAGAGTGACCATGCCTTGATGCTGCGTGAGCTCCAGAAGCTGCTGCAGGAGGA
GAGGACCCAGCGCCAGGACTTGGAGCTTAGGTTAGAAGAGACCCGAGAAGCCTTGGCAGGACGAGCATAT
GCAGCTGAACAGATGGAAGGATTTGAACTGCAGACCAAGCAGCTGACCCGTGAGGTGGAGGAGCTGAAAA
GTGAACTGCAGGCCATTCGAGATGAGAAGAATCAGCCAGATCCCCGGCTGCAAGAACTTCAGGAAGAGGC
TGCCCGCCTTAAGAGCCATTTCCAGGCTCAGTTACAGCAGGAAATGAGAAAGACAGCTCTTGCAGAGGAT
CAACTCCGTCAGCAATCTCAGGTAGAAGAACAGAGGGTGGCAGCCCTGGAGAATCAAATATCCGAGGTGT
CTGAGCTGCTAGGCACCTACGAGAAAGCCAAGCAGAAGGACCAGCTGGCCATTCAGAAGCTGAAGGAGCG
CATTCTGCAGCTGGACCTGGAGAACAAGACACTGGCTCTAGCAGCCTCCAGCAGGTCCCCTTTAGACAGC
CATGGAGAGGAGTCCAGTCTGGATGTCAATGTCCTGAAAGATAAGATGGAGAAGCTGAAGAGGCTGCTGC
AGGTTGCGGCCAGGAAAAGCCAGGTGACCCTGGATGTGGAGAAGCTCTGTGACCTGGAGATAATGCCCAG
CTCGGAGGCTGCTGATGGGGAGAAGGCTACTGCACTCTATTACCAACAGGAGCTGAAACAGCTGAAGGAA
GAGTTTGAGAGGTACAAGATGAGAGCCCAGGTTGTCCTCAAAAGCAAGAATACCAAAGATGGTAACCTGG
GAAAGGAGCTGGAGGCAGCCCAGGAACAGCTTGCAGAGCTGAAGGAGAAGTATATTTCCCTGCGGCTCTC
CTGCGAGGAGCTGGAGCACCAACACCAGCAGGAGGCTGATGACTGGAAGCAGGAGCTGGCCCGGCTGCAG
CAGCTCCACCGGCAGGAGCTGGAGCGGTGCCAGCTGGACTTCAGGGACCGCACACTGAAACTGGAGGAGG
AGCTGCACAAGCAGCGGGATCGTGCCCTAGCTGTGCTCACCGAGAAGGACTTGGAACTGGAGCAACTGCG
TTCTGTGGCCTTGGCCTCTGGGCTGCCAGGACGCAGAAGTCCTGTGGGTGGTGGCGGTCCTGGGGACCCA
GCTGACACATCATCCTCTGATAGCCTGACCCAAGCATTACAACTTGCAGCGGCCAATGAGCCCACTTTCT
TTCTGTACGCTGAGCAACTGGCCCGCAAGGAGGTGGAGATCACATCACTGAGGAAGCAGAAGCACAGGCT
GGAGGTCGAGGTGCATCAGCTGCAGGATCGGCTGCTGGAGGAGGGCGAACGGCATCGTGAGGAGGTTGCA
GCCCTGCAGAGCCACATCGAAAAGAACATCAGGGACCAGAGCAGGGAGGGAGCCAATCTGGAGTACCTCA
AAAACATCATCTACCGCTTCCTGACCTTACCTGACTCCCTGGGCCGCCAGCAGACTCTCACAGCCATACT
GACTATCTTGCACTTCAGTCCAGAGGAGAAACAAGTGATAATGCGACTCCCAACCAGTGCCAGCTGGTGG
CCTTCTGGCAAGAGATGA

Translation (775 aa):
MEKFGMNFGGGPSKKDLLETIETQKKQLLQYQARLKDVVRAYKSLLKEKEALEASIKVLSVSHEADVGLA
GVQLPGLTFPDSVDDRCSTHSEDSTGTATSLDTAASLTSTKGEFGVEDDRPARGPPPPKSEEASWSESGV
SSSSGDGPFAGGEVDKRLHQLKTQLATLTSSLATVTQEKSRMEASYLADKKKMKQDLEDASNKAEEERAR
LEGELKGLQEQIAETKARLITQQHDRAQEQSDHALMLRELQKLLQEERTQRQDLELRLEETREALAGRAY
AAEQMEGFELQTKQLTREVEELKSELQAIRDEKNQPDPRLQELQEEAARLKSHFQAQLQQEMRKTALAED
QLRQQSQVEEQRVAALENQISEVSELLGTYEKAKQKDQLAIQKLKERILQLDLENKTLALAASSRSPLDS
HGEESSLDVNVLKDKMEKLKRLLQVAARKSQVTLDVEKLCDLEIMPSSEAADGEKATALYYQQELKQLKE
EFERYKMRAQVVLKSKNTKDGNLGKELEAAQEQLAELKEKYISLRLSCEELEHQHQQEADDWKQELARLQ
QLHRQELERCQLDFRDRTLKLEEELHKQRDRALAVLTEKDLELEQLRSVALASGLPGRRSPVGGGGPGDP
ADTSSSDSLTQALQLAAANEPTFFLYAEQLARKEVEITSLRKQKHRLEVEVHQLQDRLLEEGERHREEVA
ALQSHIEKNIRDQSREGANLEYLKNIIYRFLTLPDSLGRQQTLTAILTILHFSPEEKQVIMRLPTSASWW
PSGKR


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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