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Report for CCDS31592.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31592.1 Public Homo sapiens 11 SLC22A25 24 110 108 CCDS HistoryNCBI Gene:387601Re-query CCDS DB by CCDS ID:31592.1Re-query CCDS DB by GeneID:387601See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31592.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000306494.11 ENSP00000307443.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000306494.11Link to Ensembl Protein Viewer:ENSP00000307443.6Re-query CCDS DB by Nucleotide ID:ENST00000306494Re-query CCDS DB by Protein ID:ENSP00000307443
Original member Current member NCBI NM_199352.6 NP_955384.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_199352.6Link to Protein Sequence:NP_955384.3Re-query CCDS DB by Nucleotide ID:NM_199352Re-query CCDS DB by Protein ID:NP_955384Link to BLAST:NP_955384.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_955384.3 547 Q6T423 547 100% 0 0

Chromosomal Locations for CCDS 31592.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 63163824 63164073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 63164526 63164634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 63166044 63166258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 63180660 63180775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 63183694 63183817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 63217314 63217482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 63217581 63217735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 63228461 63228564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 63229251 63229652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1644 nt):
ATGGCCTTTCAGGACCTCCTAGATCAAGTTGGAGGCCTGGGGAGATTCCAGATCCTTCAGATGGTTTTCC
TTATAATGTTCAACGTCATAGTATACCATCAAACTCAGCTGGAGAACTTCGCAGCATTCATACTTGATCA
TCGCTGCTGGGTTCATATACTGGACAATGACACTATCCCTGACAATGACCCTGGGACCCTCAGCCAGGAT
GCCCTCCTGAGAATCTCCATCCCATTCGACTCAAATCTGAGGCCAGAGAAGTGTCGTCGCTTTGTCCATC
CCCAGTGGAAGCTCATTCATCTGAATGGGACCTTCCCCAACACGAGTGAGCCAGATACAGAGCCCTGTGT
GGATGGCTGGGTATATGACCAAAGCTCCTTCCCTTCCACCATTGTGACTAAGTGGGATCTGGTATGCGAA
TCTCAACCACTGAATTCAGTAGCTAAATTTCTATTCATGGCTGGAATGATGGTGGGAGGCAACCTATATG
GCCATTTGTCAGACAGGTTTGGGAGAAAGTTCGTGCTCAGATGGTCTTACCTCCAGCTCGCCATTGTAGG
CACCTGTGCGGCCTTTGCTCCCACCATCCTCGTATACTGCTCCCTGCGCTTCTTGGCTGGGGCTGCTACA
TTTAGCATCATTGTAAATACTGTTTTGTTAATTGTAGAGTGGATAACTCACCAATTCTGTGCCATGGCAT
TGACATTGACACTTTGTGCTGCTAGTATTGGACATATAACCCTGGGAAGCCTGGCTTTTGTCATTCGAGA
CCAGTGCATCCTCCAGTTGGTGATGTCTGCACCATGCTTTGTCTTCTTTCTGTTCTCAAGGTGGCTGGCA
GAGTCTGCTCGGTGGCTCATTATCAACAACAAACCAGAAGAGGGCTTAAAGGAACTTAGAAAAGCTGCAC
ACAGGAATGGAATGAAGAATGCTGAAGACATCCTAACCATGGAGGTTTTGAAATCCACCATGAAGCAAGA
ACTGGAGGCAGCACAGAAAAAGCATTCTCTTTGTGAATTGCTCCGCATACCCAACATATGTAAAAGAATC
TGTTTCCTGTCCTTTGTGAGATTTGCAAGTACCATCCCTTTTTGGGGCCTTACTTTGCACCTCCAGCATC
TGGGAAACAATGTTTTCCTGTTGCAGACTCTCTTTGGTGCAGTCACCCTCCTGGCCAATTGTGTTGCACC
TTGGGCACTGAATCACATGAGCCGTCGACTAAGCCAGATGCTTCTCATGTTCCTACTGGCAACCTGCCTT
CTGGCCATCATATTTGTGCCTCAAGAAATGCAGACCCTGCGTGTGGTTTTGGCAACCCTGGGTGTGGGAG
CTGCTTCTCTTGGCATTACCTGTTCTACTGCCCAAGAAAATGAACTAATTCCTTCCATAATCAGGGGAAG
AGCTACTGGAATCACTGGAAACTTTGCTAATATTGGGGGAGCCCTGGCTTCCCTCATGATGATCCTAAGC
ATATATTCTCGACCCCTGCCCTGGATCATCTATGGAGTCTTTGCCATCCTCTCTGGCCTTGTTGTCCTCC
TCCTTCCTGAAACCAGGAACCAGCCTCTTCTTGACAGCATCCAGGATGTGGAAAATGAGGGAGTAAATAG
CCTAGCTGCCCCTCAGAGGAGCTCTGTGCTATAG

Translation (547 aa):
MAFQDLLDQVGGLGRFQILQMVFLIMFNVIVYHQTQLENFAAFILDHRCWVHILDNDTIPDNDPGTLSQD
ALLRISIPFDSNLRPEKCRRFVHPQWKLIHLNGTFPNTSEPDTEPCVDGWVYDQSSFPSTIVTKWDLVCE
SQPLNSVAKFLFMAGMMVGGNLYGHLSDRFGRKFVLRWSYLQLAIVGTCAAFAPTILVYCSLRFLAGAAT
FSIIVNTVLLIVEWITHQFCAMALTLTLCAASIGHITLGSLAFVIRDQCILQLVMSAPCFVFFLFSRWLA
ESARWLIINNKPEEGLKELRKAAHRNGMKNAEDILTMEVLKSTMKQELEAAQKKHSLCELLRIPNICKRI
CFLSFVRFASTIPFWGLTLHLQHLGNNVFLLQTLFGAVTLLANCVAPWALNHMSRRLSQMLLMFLLATCL
LAIIFVPQEMQTLRVVLATLGVGAASLGITCSTAQENELIPSIIRGRATGITGNFANIGGALASLMMILS
IYSRPLPWIIYGVFAILSGLVVLLLPETRNQPLLDSIQDVENEGVNSLAAPQRSSVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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