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Report for CCDS38751.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
38751.1 Public Mus musculus 4 Tomm5 23 108 98 CCDS HistoryNCBI Gene:68512Re-query CCDS DB by CCDS ID:38751.1Re-query CCDS DB by GeneID:68512See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 38751.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000107810.2 ENSMUSP00000103440.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000107810.2Link to Ensembl Protein Viewer:ENSMUSP00000103440.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000107810Re-query CCDS DB by Protein ID:ENSMUSP00000103440
Original member Current member NCBI NM_001099675.1 NP_001093145.1 Accepted alive Link to Nucleotide Sequence:NM_001099675.1Link to Protein Sequence:NP_001093145.1Re-query CCDS DB by Nucleotide ID:NM_001099675Re-query CCDS DB by Protein ID:NP_001093145Link to BLAST:NP_001093145.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001093145.1 51 B1AXP6-1 51 100% 0 0

Chromosomal Locations for CCDS 38751.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 45105610 45105644 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 45107913 45108033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (156 nt):
ATGTTCCGGATCGAGGGTCTCGCGCCCAAGTTGGACCCGGAGGAGATGAAGCGGAAGATGCGTGAGGATG
TGGTCTCCTCCATTCGGAACTTCCTCATCTACGTGGCCCTGCTGCGAGTCACTCCATATATCTTAAAGAA
GCTGGATAGCATCTGA

Translation (51 aa):
MFRIEGLAPKLDPEEMKRKMREDVVSSIRNFLIYVALLRVTPYILKKLDSI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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