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Report for CCDS34498.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34498.1 Public Homo sapiens 6 CFAP206 24 110 108 CCDS HistoryNCBI Gene:154313Re-query CCDS DB by CCDS ID:34498.1See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34498.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369562.9 ENSP00000358575.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369562.9Link to Ensembl Protein Viewer:ENSP00000358575.4Re-query CCDS DB by Nucleotide ID:ENST00000369562Re-query CCDS DB by Protein ID:ENSP00000358575
Original member Current member EBI ENST00000507897.5 ENSP00000426769.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000507897.5Link to Ensembl Protein Viewer:ENSP00000426769.1Re-query CCDS DB by Nucleotide ID:ENST00000507897Re-query CCDS DB by Protein ID:ENSP00000426769
Original member Current member NCBI NM_001031743.3 NP_001026913.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001031743.3Link to Protein Sequence:NP_001026913.1Re-query CCDS DB by Nucleotide ID:NM_001031743Re-query CCDS DB by Protein ID:NP_001026913Link to BLAST:NP_001026913.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001026913.1 622 Q8IYR0 622 100% 0 0

Chromosomal Locations for CCDS 34498.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 87409840 87409947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 87410585 87410668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 87413810 87413900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 87415686 87415874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 87416669 87416827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 87418208 87418416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 87426526 87426645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 87428626 87428824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 87431033 87431173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 87434860 87435053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 87461022 87461165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 87464020 87464250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1869 nt):
ATGCCTCCAACTCAGGCCGAAAGTGTTATAAGGAGTATTATACGAGAAATAGGACAAGAATGTGCAGCCC
ATGGAGAGATTGTTTCTGAAACTCTGATTGCTTTTATGGTGAAAGCTGTTGTCCTGGATCCAAGTAATGG
CTTTAACATGGATAGAACCCTCATGAAAAGTGATGTGCAGAATCTTGTTAAGCTTTGTATGACTCGGCTA
TTGGATACTAAAAATCCATCCCTGGACACTATTAAGATGCAAGTCTACTTCGATATGAATTATACGAATC
GAGTGGAATTTCTCGAAGAACATCACCGGGTCCTAGAGTCTAGATTAGGCTCTGTTACCCGAGAAATTAC
AGATAACAGAGCATGTGCTAAAGAAGAATTGGAAAGCCTCTACCGGAAGATTATCAGCTATGTGTTACTC
CGCTCTGGCCTTGGATCCCCTACAGACATCAAGACTGTCAGAGAGGTAACAGCTGCTCTACAGAGTGTTT
TTCCTCAGGCAGAGCTTGGGACATTTCTAACTCTTTCTAAGAAGGACAAAGAACGCCAGCTGAAAGAACT
CACCATGATTGTTACTGGAATTCGTTTATTTAACAGAGACTGTGGAAAAGGAGGAGAAGGCATTGATGAT
TTGCCAGCTGTTCTCCATGTAGCAATCCCAGCCACCATGCAGCATATTGATTACCAGCTTGAGACTGCCC
GGAGCCAGGTATACCGCTACACAGCCATCCTTGAGAAGGCAGCCAACGACCCACTCATGAGGGCTGAACT
TCAGCCATATATGTTAAAAGAAGCGCTATATAATATACGACAATATGAGGTCTTCCTTCAGATCATTTTG
TCAGATATAATTACTGGTGCTCAAGAAGTGGAAATGATGACAAAACAGTTAGGAGCCCATCTGGAACAAC
TAAAAATGACCATAAAATCAAAGATAGCGGTCCCAACATCACAAGTCTTTCCTATCTTCATTGCACTTTC
TACTCTGTGGACCAGCTTGCAAGACGAAACTATTGTGGTTGGTGTCCTCAGTAATTTATTCACTCACATT
CAGCCATTCTTGGGTGCTCACGAACTATACTTTCCTGAGAGAGTGATGCAATGTCATCTTAATGGAGCGA
CTGTGAAAACTGATGTGTGTAGAATGAAAGAACACATGGAAGATAGAGTAAATGTGGCAGATTTCAGAAA
ACTAGAATGGCTTTTCCCAGAAACAACAGCAAATTTTGATAAACTGTTAATTCAATATCGGGGATTTTGT
GCTTACACGTTTGCTGCAACAGATGGTCTTCTCCTTCCAGGAAATCCAGCAATTGGAATTTTAAAATATA
AAGAAAAATATTACACATTCAATAGTAAAGATGCTGCATATTCATTTGCAGAAAATCCTGAACATTATAT
TGACATAGTTAGAGAAAAGGCCAAAAAAAATACAGAGTTAATTCAACTATTGGAACTTCATCAACAGTTT
GAAACATTTATTCCATATTCTCAGATGAGAGATGCTGACAAACATTATATAAAACCAATTACAAAATGTG
AAAGTAGCACACAGACGAATACACACATACTGCCACCAACGATTGTGAGATCATATGAGTGGAATGAATG
GGAATTAAGAAGAAAAGCTATAAAATTGGCTAATTTGCGCCAGAAAGTTACTCACTCAGTACAAACTGAT
CTTAGTCACTTGAGAAGAGAAAATTGTTCCCAAGTGTACCCTCCAAAGGACACTAGCACCCAGTCCATGA
GGGAAGACAGCACTGGGGTGCCCAGGCCTCAGATTTACTTGGCTGGTCTTCGTGGAGGAAAGAGCGAAAT
CACCGATGAGGTCAAGGTGAACTTAACTAGAGATGTGGATGAAACCTAA

Translation (622 aa):
MPPTQAESVIRSIIREIGQECAAHGEIVSETLIAFMVKAVVLDPSNGFNMDRTLMKSDVQNLVKLCMTRL
LDTKNPSLDTIKMQVYFDMNYTNRVEFLEEHHRVLESRLGSVTREITDNRACAKEELESLYRKIISYVLL
RSGLGSPTDIKTVREVTAALQSVFPQAELGTFLTLSKKDKERQLKELTMIVTGIRLFNRDCGKGGEGIDD
LPAVLHVAIPATMQHIDYQLETARSQVYRYTAILEKAANDPLMRAELQPYMLKEALYNIRQYEVFLQIIL
SDIITGAQEVEMMTKQLGAHLEQLKMTIKSKIAVPTSQVFPIFIALSTLWTSLQDETIVVGVLSNLFTHI
QPFLGAHELYFPERVMQCHLNGATVKTDVCRMKEHMEDRVNVADFRKLEWLFPETTANFDKLLIQYRGFC
AYTFAATDGLLLPGNPAIGILKYKEKYYTFNSKDAAYSFAENPEHYIDIVREKAKKNTELIQLLELHQQF
ETFIPYSQMRDADKHYIKPITKCESSTQTNTHILPPTIVRSYEWNEWELRRKAIKLANLRQKVTHSVQTD
LSHLRRENCSQVYPPKDTSTQSMREDSTGVPRPQIYLAGLRGGKSEITDEVKVNLTRDVDET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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