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Report for CCDS620.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
620.1 Public Homo sapiens 1 KANK4 24 110 108 CCDS HistoryNCBI Gene:163782Re-query CCDS DB by CCDS ID:620.1Re-query CCDS DB by GeneID:163782See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 620.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371153.9 ENSP00000360195.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371153.9Link to Ensembl Protein Viewer:ENSP00000360195.4Re-query CCDS DB by Nucleotide ID:ENST00000371153Re-query CCDS DB by Protein ID:ENSP00000360195
Original member Current member NCBI NM_181712.5 NP_859063.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_181712.5Link to Protein Sequence:NP_859063.3Re-query CCDS DB by Nucleotide ID:NM_181712Re-query CCDS DB by Protein ID:NP_859063Link to BLAST:NP_859063.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_859063.3 995 Q5T7N3-1 995 100% 0 0

Chromosomal Locations for CCDS 620.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 62238277 62238381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 62247472 62247672 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 62253067 62253209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 62263092 62263311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 62266732 62266819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 62268287 62268505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 62271478 62271589 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 62273204 62275087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 62281549 62281564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2988 nt):
ATGGAGAAGACAGATGCCAAAGACCAGTCCTCTCAGGGGGATGAAGAGAAAGACCCTCCGAAGAGCCACC
CTTATTCTGTGGAGACCCCATATGGCTTTCATTTAGACCTGGACTTCCTCAAGTATGTGGATGACATCGA
GAAGGGAAACACTATCAAAAGAATTCCTATCCACAGAAGGGCCAAGCAGGCCAAATTTAGCACTCTGCCC
CGAAACTTCAGCCTTCCTGACAGTGGGGCTCGCCCCCCTGCAGCCCCGCCCCTCCAAAACTGGTCTCCCG
TGGTGCCAAGGGAGGCATCACTTGGGACACAGGAGCAAAACCAGTCACCACCGCTTGGTAATGCCCCCCA
GGCCTCAACAAGCAGGAGTGAGGTGAGCTACCACAGGAAGGCTCTGTTGGCAGAGGCCACCAGACAGTTG
GAAGCTGCTGAGCCAGAGGATGCCGAGCTCACTTTTGGGAGTGGACGGCCCCAGCTCTTGAGAGCATCCA
GCATGCCTGCCACGCTGCTGCACAGCAGGGCTTCTGAGGAGCCAGGCCTGAGCCTGGGGCCCCCTGCCCC
TCCTGCCCTCCCTCCCCTTCAGGGTGAAGGCAGTGTCTGTGATGGCACCTTTGAACCTGCAGAAGGATTG
GCAGGTTTCCACAGCTCCAGCCCACGAGCATCAACTCGGATTCCAGAGCTGGTCCAGGAGGGAGCTGAGC
CTCCAGAGGGTGTGGTGAAGGTTCCAAATCACCTCCCTCTCCCAGGCCCTCCTTTCTCATTCCAGAATGT
GCTTGTAGTTCTAGAGGACAAGGAAGATGAACACAATGCCAGAGAAGCAGAGGTGTTGTTCACCCCTGGC
TCCCCTACGCCAAGCCCGCCACCTCTGCCATCACCCATCCCTGAGAATGAGCTCCTCCTGGAAGAAATCG
AGCTCAACATCAGCGAGATTCCACCCCCGCCACCTGTAGAGGTGGACATGAGAAGCATTGGCATCAGGGT
AACTGAGGAAAGCCTGGGCCTTGCCAGGGTGGATCCAGGCAGCATCTCCAGCCTGAAACAGCAGGTCTCG
GCCCTGGAGGGAGAGTTGTCTGGAAGAACCGAGGAACTGGCACAGGTCAGAACTGCTCTCCAGCAGCAGG
AAGAGGAAATCAAAGCTAGGGAGCAAAGAATTCGAGAGCTGGAGTTCACTGTAGCCCAACTGGAAGGACA
GTTTCACCAAGAGAACGCCAAAGACACTCAGGGCCAGACGGACGTGATGGTGAACACTGACCCTGTCCAT
GGACTCTTGACCAGGGAGTCGTGTGATAAGGGCATTGAAGTCAACCTTCTAGGCAGCATGGAGTCTGAAA
GCTGGGGGCACCGAGGAGAGGAGAATGGCCTCCTATGGGGGCCAGATGGTCATAAACAAGGGAATCAGAG
CCCAGCAGAACGTGTGCTTCTGCCCCAGCTGTCACTGCCACAGGGACCCGAGCAGGTCCTTACCTCCTCT
GTACATAGCTTCCTCTCCACTGAACTCAGGATTGAAGAAGCAGGCACTGAACAGGAAGGAGGCCCTCAGG
GAGGAACCAGGGGAGCAGGAGGCTTTCTGTGGGGCAGCGACAGAAAGACTCCCCCAGCAGGGAGGGAGGA
GACCAGTTCCAATCTCCCAGGGAAGGAGCACCCGGGAAGGCCACCAAGCTCGCCAACGGATGCCACTATT
GGGCAGTATGTGAAGAAGATCCAGGAGCTCCTGCAGGAGCAGTGGAACTGCCTGGAGCATGGGTACCCGG
AGCTGGCCAGCGCCATCAAGCAGCCAGCCTCCAAGCTCAGCAGCATCCAGAGCCAGCTGCTGAGCTCCCT
CAACCTGCTGCTGTCGGCCTACTCGGCCCAGGCTCACCCACCCAAGGAGCCACCGGCCTCCTCCTCCTCC
CCGCCAGTGGAGATCTCCCCATCGACCAGCCTTAAATCCATAATGAAAAAGAAAGACTATGGCTTCCGTG
CAGGAGGTAATGGGACCAAAAAGAACCTTCAGTTTGTTGGGGTTAACGGTGGGTATGAGACCACCTCAAG
TGAGGAGACCAGCGGTGAGGACAGCACCCCAGAGGACTTGTCTGACAGCGAGGCAGAGAAGAAGTGTGAC
GGCCCAGATCACAAGCATGTCAAAGATGCCCATCTCACCTGCGAGGCTGGGCAGGGCATCCCTGAGGGCA
CCTGCCATGCTGCCCAGGAAAGTGGGCCTGGGGAAGAAGTCCCCCACTCCAAGGCCGAGAGATATAAACC
CTCAGAAGAATTTCTTAATGCATGCCGGGCACTGAGCCAGCATCTGCCAGAAACTGGGACCACCACAGAC
CAGCTCTTGAGGCAAAGCTTGAACACCATCAGTCAAGAGTGGTTCCGCGTCTCCAGCCGGAAGTCGTCTA
GCCCCGCCGTGGTGGCCTCCTACCTCCACGAGGTCCAGCCTCACTCCCCACACTTCCTGAAACTGCTTGT
CAACTTGGCCGATCACAACGGGAACACGGCCCTTCACTACAGCGTGTCCCACTCCAACTTCTCCATCGTG
AAGCTGCTGCTGGAGACAGGCGTCTGCAATGTGGACCATCAGAACAAAGCTGGCTACACTGCCGTAATGA
TCACTCCCTTGGCTTCCGCAGAGACCAATGAAGACATGGCTGTTGTCTGGAAGCTCTTAAGAGAAGGAAA
TGTGAACATTCAAGCTACTCAGGGAGGCCAGACTGCGCTGATGCTGGGAGTCAGCCACGACAGGGAGGAC
ATGGTTCAAGCGCTGCTTAGCTGCCAGGCAGATGTCAATCTGCAGGACCACGATGGATCCTCGGCCCTCA
TGGTGGCCTGTCACCATGGCAACGTGGACCTGGTGCGGCTGCTCCTGGCACACCCAGCCTGCGACAGCAG
CCTGACTGACAAGGCTGGCCGCACAGCTTTGTCCATCGCTCTGAAGTCACCCACCCATATGGAAATTGCT
GGGCTTCTGAGAGCCCACGCGGAGCAGGGCAGGTCCCTGGGGCTGTAG

Translation (995 aa):
MEKTDAKDQSSQGDEEKDPPKSHPYSVETPYGFHLDLDFLKYVDDIEKGNTIKRIPIHRRAKQAKFSTLP
RNFSLPDSGARPPAAPPLQNWSPVVPREASLGTQEQNQSPPLGNAPQASTSRSEVSYHRKALLAEATRQL
EAAEPEDAELTFGSGRPQLLRASSMPATLLHSRASEEPGLSLGPPAPPALPPLQGEGSVCDGTFEPAEGL
AGFHSSSPRASTRIPELVQEGAEPPEGVVKVPNHLPLPGPPFSFQNVLVVLEDKEDEHNAREAEVLFTPG
SPTPSPPPLPSPIPENELLLEEIELNISEIPPPPPVEVDMRSIGIRVTEESLGLARVDPGSISSLKQQVS
ALEGELSGRTEELAQVRTALQQQEEEIKAREQRIRELEFTVAQLEGQFHQENAKDTQGQTDVMVNTDPVH
GLLTRESCDKGIEVNLLGSMESESWGHRGEENGLLWGPDGHKQGNQSPAERVLLPQLSLPQGPEQVLTSS
VHSFLSTELRIEEAGTEQEGGPQGGTRGAGGFLWGSDRKTPPAGREETSSNLPGKEHPGRPPSSPTDATI
GQYVKKIQELLQEQWNCLEHGYPELASAIKQPASKLSSIQSQLLSSLNLLLSAYSAQAHPPKEPPASSSS
PPVEISPSTSLKSIMKKKDYGFRAGGNGTKKNLQFVGVNGGYETTSSEETSGEDSTPEDLSDSEAEKKCD
GPDHKHVKDAHLTCEAGQGIPEGTCHAAQESGPGEEVPHSKAERYKPSEEFLNACRALSQHLPETGTTTD
QLLRQSLNTISQEWFRVSSRKSSSPAVVASYLHEVQPHSPHFLKLLVNLADHNGNTALHYSVSHSNFSIV
KLLLETGVCNVDHQNKAGYTAVMITPLASAETNEDMAVVWKLLREGNVNIQATQGGQTALMLGVSHDRED
MVQALLSCQADVNLQDHDGSSALMVACHHGNVDLVRLLLAHPACDSSLTDKAGRTALSIALKSPTHMEIA
GLLRAHAEQGRSLGL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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