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Report for CCDS31490.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31490.1 Public Homo sapiens 11 OR4A47 24 110 108 CCDS HistoryNCBI Gene:403253Re-query CCDS DB by CCDS ID:31490.1Re-query CCDS DB by GeneID:403253See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31490.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000446524.2 ENSP00000412752.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000446524.2Link to Ensembl Protein Viewer:ENSP00000412752.1Re-query CCDS DB by Nucleotide ID:ENST00000446524Re-query CCDS DB by Protein ID:ENSP00000412752
Original member Current member NCBI NM_001005512.2 NP_001005512.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001005512.2Link to Protein Sequence:NP_001005512.2Re-query CCDS DB by Nucleotide ID:NM_001005512Re-query CCDS DB by Protein ID:NP_001005512Link to BLAST:NP_001005512.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005512.2 309 Q6IF82 309 100% 0 0

Chromosomal Locations for CCDS 31490.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 48488793 48489722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (930 nt):
ATGGAGCCAAGGAAAAATGTGACTGACTTTGTCCTCTTGGGCTTCACACAGAATCCAAAGGAGCAGAAAG
TACTTTTTGTTATGTTCTTGCTCTTCTACATTTTGACCATGGTGGGCAACCTGCTCATTGTAGTGACCGT
AACTGTCAGTGAGACCCTGGGCTCACCAATGTACTTCTTTCTTGCTGGCTTATCATTTATAGATATCATT
TATTCTTCATCCATTTCCCCCAGATTGATTTCAGGCTTGTTCTTTGGGAATAATTCCATATCCTTCCAAT
CTTGCATGGCCCAGCTCTTTATCGAGCACATTTTCGGTGGGTCAGAGGTCTTTCTCCTGTTGGTGATGGC
CTATGACTGCTATGTGGCCATCTGTAAGCCCTTGCATTATTTGGTTATCATGAGACAATGGGTGTGTGTT
GTGCTGCTGGTAGTGTCCTGGGTTGGAGGATTTCTGCACTCAGTATTTCAACTTAGCATTATTTATGGGC
TCCCATTCTGTGGCCCCAATGTCATTGATCATTTTTTCTGTGACATGTATCCCTTATTGAAACTGGTCTG
CACTGACACCCATGCTATTGGCCTCTTAGTGGTGGCCAATGGAGGACTGGCTTGCACTATTGTGTTTCTG
CTCTTACTCATCTCTTATGGTGTCATCTTGCACTCTTTAAAGAACCTTAGTCAGAAAGGGAGGCAAAAAG
CCCTCTCAACCTGCAGTTCCCACATGACTGTGGTTGTCTTCTTCTTTGTTCCTTGTATTTTTATGTATGC
TAGACCTGCTAGGACCTTCCCCATTGACAAATCAGTGAGTGTGTTTTATACAGTCATAACCCCAATGCTG
AACCCCTTAATCTACACTCTGAGAAATTCTGAGATGACAAGTGCTATGAAGAAGCTCTGGAGAAGAGACC
TCATATCAAGTAGTACATAA

Translation (309 aa):
MEPRKNVTDFVLLGFTQNPKEQKVLFVMFLLFYILTMVGNLLIVVTVTVSETLGSPMYFFLAGLSFIDII
YSSSISPRLISGLFFGNNSISFQSCMAQLFIEHIFGGSEVFLLLVMAYDCYVAICKPLHYLVIMRQWVCV
VLLVVSWVGGFLHSVFQLSIIYGLPFCGPNVIDHFFCDMYPLLKLVCTDTHAIGLLVVANGGLACTIVFL
LLLISYGVILHSLKNLSQKGRQKALSTCSSHMTVVVFFFVPCIFMYARPARTFPIDKSVSVFYTVITPML
NPLIYTLRNSEMTSAMKKLWRRDLISSST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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