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Report for CCDS6169.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6169.1 Public Homo sapiens 8 BPNT2 24 110 108 CCDS HistoryNCBI Gene:54928Re-query CCDS DB by CCDS ID:6169.1Re-query CCDS DB by GeneID:54928See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6169.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262644.9 ENSP00000262644.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000262644.9Link to Ensembl Protein Viewer:ENSP00000262644.4Re-query CCDS DB by Nucleotide ID:ENST00000262644Re-query CCDS DB by Protein ID:ENSP00000262644
Original member Current member NCBI NM_017813.5 NP_060283.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017813.5Link to Protein Sequence:NP_060283.3Re-query CCDS DB by Nucleotide ID:NM_017813Re-query CCDS DB by Protein ID:NP_060283Link to BLAST:NP_060283.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060283.3 359 Q9NX62 359 100% 0 0

Chromosomal Locations for CCDS 6169.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 56963793 56964064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 56966191 56966352 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 56978050 56978145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 56980035 56980197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 56993199 56993585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1080 nt):
ATGGCCCCCATGGGCATCCGCCTTTCCCCACTGGGGGTGGCAGTGTTTTGCCTGCTGGGGCTCGGCGTGC
TCTACCACCTCTACTCGGGCTTCTTGGCCGGCCGCTTCAGCCTCTTCGGCCTGGGCGGCGAGCCTGGCGG
CGGCGCGGCGGGGCCCGCGGCCGCGGCCGATGGGGGCACCGTGGACTTGCGCGAGATGCTGGCTGTGTCA
GTGCTGGCCGCAGTCCGCGGCGGCGACGAGGTGAGGCGCGTCCGCGAGAGCAACGTCCTCCACGAGAAGT
CCAAGGGGAAGACGCGCGAGGGAGCCGAGGACAAGATGACCAGCGGCGACGTGCTGTCCAACCGCAAGAT
GTTCTACCTGCTCAAGACCGCCTTCCCCAGCGTCCAGATTAATACTGAGGAACACGTGGATGCAGCTGAT
CAGGAGGTTATCTTGTGGGATCATAAGATTCCTGAGGATATCCTAAAGGAAGTAACTACTCCTAAAGAGG
TACCAGCAGAAAGTGTTACTGTCTGGATTGACCCACTTGATGCTACACAGGAATATACAGAGGATCTTCG
AAAGTACGTCACTACTATGGTGTGTGTGGCTGTAAATGGTAAACCCATGCTAGGAGTTATACATAAGCCA
TTTTCCGAATATACAGCTTGGGCAATGGTAGATGGTGGTTCAAATGTGAAAGCCCGCTCTTCCTACAATG
AGAAGACCCCAAGGATCGTTGTGTCTCGTTCCCATTCAGGGATGGTCAAACAGGTCGCTCTTCAGACTTT
TGGAAACCAGACTACAATTATCCCAGCTGGTGGTGCTGGTTATAAAGTTTTAGCACTTTTGGATGTGCCT
GATAAGAGTCAAGAAAAAGCTGATTTATACATCCATGTGACATACATCAAAAAGTGGGATATATGTGCTG
GTAATGCCATCTTAAAAGCCCTAGGGGGGCATATGACTACCCTGAGTGGTGAAGAAATCAGTTACACTGG
TTCAGACGGCATTGAAGGGGGACTCCTTGCTAGCATCAGAATGAACCACCAGGCCCTGGTCAGAAAACTC
CCAGATCTAGAAAAGACAGGACATAAATGA

Translation (359 aa):
MAPMGIRLSPLGVAVFCLLGLGVLYHLYSGFLAGRFSLFGLGGEPGGGAAGPAAAADGGTVDLREMLAVS
VLAAVRGGDEVRRVRESNVLHEKSKGKTREGAEDKMTSGDVLSNRKMFYLLKTAFPSVQINTEEHVDAAD
QEVILWDHKIPEDILKEVTTPKEVPAESVTVWIDPLDATQEYTEDLRKYVTTMVCVAVNGKPMLGVIHKP
FSEYTAWAMVDGGSNVKARSSYNEKTPRIVVSRSHSGMVKQVALQTFGNQTTIIPAGGAGYKVLALLDVP
DKSQEKADLYIHVTYIKKWDICAGNAILKALGGHMTTLSGEEISYTGSDGIEGGLLASIRMNHQALVRKL
PDLEKTGHK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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