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Report for CCDS44126.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44126.1 Public Homo sapiens 1 CFAP144 24 110 108 CCDS HistoryNCBI Gene:440585Re-query CCDS DB by CCDS ID:44126.1Re-query CCDS DB by GeneID:440585See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44126.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000335282.5 ENSP00000334415.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000335282.5Link to Ensembl Protein Viewer:ENSP00000334415.3Re-query CCDS DB by Nucleotide ID:ENST00000335282Re-query CCDS DB by Protein ID:ENSP00000334415
Original member Current member NCBI NM_001101376.3 NP_001094846.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001101376.3Link to Protein Sequence:NP_001094846.2Re-query CCDS DB by Nucleotide ID:NM_001101376Re-query CCDS DB by Protein ID:NP_001094846Link to BLAST:NP_001094846.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001094846.2 134 A6NL82 134 100% 0 0

Chromosomal Locations for CCDS 44126.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 43147952 43148084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43150761 43150820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43152828 43152931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 43156206 43156313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (405 nt):
ATGGCGGGACACCCAAAAGAGAAGGTGATTCCAGATGAGGTCCATCAGAACCAGATCTTGCGGGAACTGT
ACCTCAAGGAGCTACGAACCCAGAAACTCTACACGCAGTATCACGTGAATCCCCTCCGCAAGATTCATAC
AGTCACCAGGAAGCCCATGTCTTGGCATGATAACCTGGAGGAACCTGCAGATGCCAGGTTTCTGAATCTC
ATTCACCATGCTGCCCAGGGACCAAGGAAGAAGTACCCAGAGACACAGACTGAAAACCAGGAAGTTGGAT
GGGACTTAGAGCCCTTGATCAACCCAGAACGCCATGACCGCAGGCTGAATCACTTCAGGGTCTGCAGTGA
CATCACTCTGTACAAGGCTAAAACGTGGGGCTTAGGAGATGATCACCACAAGTAG

Translation (134 aa):
MAGHPKEKVIPDEVHQNQILRELYLKELRTQKLYTQYHVNPLRKIHTVTRKPMSWHDNLEEPADARFLNL
IHHAAQGPRKKYPETQTENQEVGWDLEPLINPERHDRRLNHFRVCSDITLYKAKTWGLGDDHHK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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