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Report for CCDS35251.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35251.1 Public Homo sapiens X GPKOW 24 110 108 CCDS HistoryNCBI Gene:27238Re-query CCDS DB by CCDS ID:35251.1Re-query CCDS DB by GeneID:27238See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35251.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000156109.7 ENSP00000156109.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000156109.7Link to Ensembl Protein Viewer:ENSP00000156109.5Re-query CCDS DB by Nucleotide ID:ENST00000156109Re-query CCDS DB by Protein ID:ENSP00000156109
Original member Current member NCBI NM_015698.6 NP_056513.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015698.6Link to Protein Sequence:NP_056513.2Re-query CCDS DB by Nucleotide ID:NM_015698Re-query CCDS DB by Protein ID:NP_056513Link to BLAST:NP_056513.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056513.2 476 Q92917 476 100% 0 0

Chromosomal Locations for CCDS 35251.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 49113621 49113755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 49113853 49113938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 49115726 49115795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 49115891 49116014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 49116221 49116323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 49117030 49117162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 49117597 49117810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 49119705 49119814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 49122398 49122522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 49122622 49122776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 49123547 49123722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1431 nt):
ATGGCTGACTCCAAAGAGGGTGTTTTGCCGCTGACGGCTGCTTCCACTGCCCCAATTTCATTCGGCTTCA
CTCGCACGTCCGCACGGAGGCGGCTGGCCGACTCGGGAGACGGCGCGGGGCCATCTCCGGAGGAGAAGGA
TTTCTTGAAAACCGTGGAAGGGAGGGAGCTGCAGAGTGTGAAGCCCCAGGAGGCCCCCAAGGAACTCGTC
ATCCCTTTGATCCAGAATGGCCATCGCAGGCAGCCACCAGCCCGGCCCCCTGGGCCATCCACAGATACTG
GGGCCTTGGCGGATGGGGTGGTGTCCCAGGCTGTGAAGGAGCTCATTGCGGAATCCAAGAAGTCTCTGGA
AGAGAGAGAGAATGCGGGTGTCGACCCCACGCTCGCTATCCCCATGATCCAGAAAGGATGCACCCCCAGC
GGGGAAGGGGCAGACAGCGAACCCCGGGCAGAGACAGTGCCAGAGGAGGCTAATTATGAGGCGGTCCCCG
TGGAGGCCTATGGGCTGGCCATGCTGCGGGGCATGGGCTGGAAACCTGGCGAGGGCATCGGCCGCACCTT
CAATCAAGTAGTGAAGCCCCGTGTCAACTCACTGAGGCCCAAGGGGTTAGGGCTGGGTGCCAACCTGACC
GAGGCCCAGGCCTTGACCCCCACTGGCCCCTCCCGCATGCCAAGACCAGATGAGGAGCAAGAGAAAGATA
AGGAAGATCAGCCTCAAGGGCTGGTGCCTGGAGGAGCTGTGGTGGTTCTTTCTGGCCCTCACCGAGGCCT
CTATGGGAAGGTGGAAGGCCTTGATCCTGACAATGTTCGGGCCATGGTTCGTCTGGCTGTGGGGAGCCGG
GTGGTGACTGTTAGTGAGTACTACCTGCGGCCTGTCTCCCAGCAGGAGTTTGACAAGAACACCTTGGATC
TCAGGCAACAGAACGGAACTGCCTCATCACGGAAGACCCTCTGGAATCAAGAACTCTACATCCAGCAGGA
CAACTCAGAGAGGAAGCGGAAACACCTTCCAGACCGACAGGATGGGCCTGCAGCCAAGAGTGAGAAAGCA
GCCCCCAGAAGTCAGCACTGGTTGCACAGGGACCTGCGTGTGCGGTTTGTGGACAACATGTACAAAGGAG
GCCAATATTACAACACCAAGATGATAATTGAAGATGTCCTAAGCCCAGATACCTGTGTATGTCGGACAGA
TGAAGGCCGAGTCCTGGAAGGCCTGAGGGAAGACATGCTGGAGACCCTGGTTCCCAAGGCAGAGGGTGAC
CGTGTGATGGTGGTGCTGGGCCCACAGACTGGAAGGGTGGGACATTTGCTGAGCCGGGACAGAGCACGGA
GCCGGGCTTTGGTGCAACTGCCAAGAGAAAATCAGGTGGTGGAGCTTCACTACGATGCCATCTGCCAGTA
CATGGGCCCTAGTGACACAGATGATGACTGA

Translation (476 aa):
MADSKEGVLPLTAASTAPISFGFTRTSARRRLADSGDGAGPSPEEKDFLKTVEGRELQSVKPQEAPKELV
IPLIQNGHRRQPPARPPGPSTDTGALADGVVSQAVKELIAESKKSLEERENAGVDPTLAIPMIQKGCTPS
GEGADSEPRAETVPEEANYEAVPVEAYGLAMLRGMGWKPGEGIGRTFNQVVKPRVNSLRPKGLGLGANLT
EAQALTPTGPSRMPRPDEEQEKDKEDQPQGLVPGGAVVVLSGPHRGLYGKVEGLDPDNVRAMVRLAVGSR
VVTVSEYYLRPVSQQEFDKNTLDLRQQNGTASSRKTLWNQELYIQQDNSERKRKHLPDRQDGPAAKSEKA
APRSQHWLHRDLRVRFVDNMYKGGQYYNTKMIIEDVLSPDTCVCRTDEGRVLEGLREDMLETLVPKAEGD
RVMVVLGPQTGRVGHLLSRDRARSRALVQLPRENQVVELHYDAICQYMGPSDTDDD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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