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Report for CCDS35125.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35125.1 Public Homo sapiens 9 OR1Q1 24 110 108 CCDS HistoryNCBI Gene:158131Re-query CCDS DB by CCDS ID:35125.1See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 35125.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000297913.3 ENSP00000297913.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000297913.3Link to Ensembl Protein Viewer:ENSP00000297913.2Re-query CCDS DB by Nucleotide ID:ENST00000297913Re-query CCDS DB by Protein ID:ENSP00000297913
Original member Current member NCBI NM_012364.1 NP_036496.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012364.1Link to Protein Sequence:NP_036496.1Re-query CCDS DB by Nucleotide ID:NM_012364Re-query CCDS DB by Protein ID:NP_036496Link to BLAST:NP_036496.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036496.1 314 Q15612 314 100% 0 0

Chromosomal Locations for CCDS 35125.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 122614738 122615682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (945 nt):
ATGGACAACAGCAACTGGACCAGTGTGTCCCATTTTGTTCTCTTGGGCATTTCCACCCACCCAGAAGAGC
AAATCCCACTCTTCCTTGTTTTCTCACTCATGTACGCAATCAATATTTCTGGCAACTTGGCCATCATCAC
ACTGATTCTCTCTGCTCCACGCCTCCACATCCCCATGTACATCTTCCTCAGTAACTTGGCCTTGACAGAC
ATCTGCTTCACCTCCACCACGGTCCCCAAGATGCTGCAGATTATTTTCTCCCCTACAAAGGTAATTTCCT
ACACAGGCTGTTTAGCCCAAACTTATTTCTTCATTTGCTTCGCCGTCATGGAAAACTTCATCCTGGCTGT
GATGGCCTATGACAGGTACATTGCCATCTGCCACCCTTTCCACTACACTATGATCCTGACTAGAATGCTG
TGTGTGAAGATGGTGGTCATGTGCCATGCTCTCTCCCACCTTCATGCCATGCTGCATACCTTTCTCATAG
GCCAACTAATCTTCTGTGCAGATAACAGAATCCCCCACTTCTTCTGTGACCTCTACGCTCTGATGAAGAT
CTCCTGCACCAGCACCTACCTCAACACCCTTATGATTCACACAGAAGGTGCTGTTGTAATCAGTGGAGCT
CTGGCCTTCATTACTGCCTCCTATGCCTGCATCATCCTGGTGGTCCTCCGGATCCCCTCAGCCAAGGGCA
GGTGGAAAACCTTTTCTACCTGCGGCTCCCACCTCACTGTGGTGGCCATATTCTATGGCACCCTCAGTTG
GGTCTACTTCCGGCCCCTTTCCAGCTATTCAGTGACCAAGGGTCGCATTATAACAGTCGTGTACACAGTG
GTGACTCCCATGCTGAACCCCTTCATCTACAGCCTGAGGAATGGGGATGTCAAGGGAGGCTTCATGAAAT
GGATGAGCAGAATGCAGACTTTTTTCTTTAGATAA

Translation (314 aa):
MDNSNWTSVSHFVLLGISTHPEEQIPLFLVFSLMYAINISGNLAIITLILSAPRLHIPMYIFLSNLALTD
ICFTSTTVPKMLQIIFSPTKVISYTGCLAQTYFFICFAVMENFILAVMAYDRYIAICHPFHYTMILTRML
CVKMVVMCHALSHLHAMLHTFLIGQLIFCADNRIPHFFCDLYALMKISCTSTYLNTLMIHTEGAVVISGA
LAFITASYACIILVVLRIPSAKGRWKTFSTCGSHLTVVAIFYGTLSWVYFRPLSSYSVTKGRIITVVYTV
VTPMLNPFIYSLRNGDVKGGFMKWMSRMQTFFFR


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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