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Report for CCDS19044.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
19044.1 Public Mus musculus 4 Mxra8 23 108 98 CCDS HistoryNCBI Gene:74761Re-query CCDS DB by CCDS ID:19044.1Re-query CCDS DB by GeneID:74761See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 19044.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000030947.3 ENSMUSP00000030947.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000030947.3Link to Ensembl Protein Viewer:ENSMUSP00000030947.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000030947Re-query CCDS DB by Protein ID:ENSMUSP00000030947
Original member Current member NCBI NM_024263.4 NP_077225.4 Accepted alive Link to Nucleotide Sequence:NM_024263.4Link to Protein Sequence:NP_077225.4Re-query CCDS DB by Nucleotide ID:NM_024263Re-query CCDS DB by Protein ID:NP_077225Link to BLAST:NP_077225.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_077225.4 442 Q9DBV4 442 100% 0 0

Chromosomal Locations for CCDS 19044.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 155839842 155839890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155840778 155840798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155840906 155841208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155841445 155841546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155841662 155842132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155842557 155842715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155842793 155842832 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155842905 155842981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155843059 155843139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 155843305 155843330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1329 nt):
ATGGAGCTGCTGTCCCGCGTCCTGCTGTGGAAACTGCTGCTTCTTCAGAGCTCTGCAGTCCTGTCCTCAG
GGCCTTCAGGGACCGCAGCAGCCAGCAGCTCTCTGGTGTCTGAGTCTGTGGTGAGCTTGGCAGCCGGAAC
CCAGGCTGTGCTACGCTGCCAGAGCCCCCGCATGGTGTGGACCCAAGACCGGCTGCATGATCGCCAGCGC
GTGGTCCACTGGGACCTCAGCGGGGGCCCGGGCAGCCAACGGCGCCGACTTGTGGATATGTATTCGGCGG
GTGAACAGCGCGTGTACGAGCCGCGCGATCGCGACCGCCTCCTGCTGTCGCCTTCTGCTTTCCACGACGG
CAACTTCTCGCTGCTCATTCGCGCTGTGGACAGAGGCGATGAAGGGGTGTACACCTGCAACCTGCACCAT
CACTACTGCCACCTCGATGAGAGCCTGGCTGTGCGCCTCGAGGTTACAGAGGATCCCCTATTAAGTCGCG
CATACTGGGACGGTGAGAAGGAAGTGTTGGTGGTGGCCCATGGCGCGCCGGCACTGATGACCTGCATCAA
CCGTGCGCACGTGTGGACTGACCGCCATTTAGAGGAGGCGCAGCAGGTGGTCCATTGGGACCGACAGCTA
CCTGGGGTGTCACACGACCGCGCCGACCGCCTGCTTGACCTGTATGCATCTGGCGAGCGCCGCGCCTATG
GGCCACCCTTCCTGCGTGATCGCGTGTCAGTGAACACCAACGCTTTTGCACGCGGTGACTTCTCCCTACG
CATCGATGAGCTGGAGCGAGCTGATGAGGGCATCTATTCCTGCCACCTGCACCATCACTACTGTGGCCTC
CACGAGCGCCGAGTCTTCCACCTACAGGTCACAGAGCCTGCCTTTGAGCCACCAGCTCGTGCTTCTCCTG
GCAATGGGTCTGGTCACAGCAGTGCTCCTAGCCCAGATCCCACCCTGACCCGAGGCCACAGCATCATCAA
TGTCATTGTCCCAGAGGACCACACACATTTCTTCCAGCAACTGGGCTATGTGTTGGCCACGCTGCTGCTC
TTCATCTTGCTGCTCATCACTGTAGTCCTGGCTACACGATATCGTCACAGCGGAGGATGCAAGACGTCGG
ACAAAAAAGCTGGGAAGTCAAAGGGGAAGGATGTGAACATGGTGGAGTTTGCTGTAGCCACAAGGGATCA
GGCTCCATATAGGACTGAGGACATCCAGCTAGATTACAAAAACAACATCCTGAAGGAGAGGGCTGAGCTG
GCCCATAGTCCTCTGCCTGCCAAGGATGTGGATCTGGATAAAGAGTTCAGGAAGGAGTACTGCAAATAA

Translation (442 aa):
MELLSRVLLWKLLLLQSSAVLSSGPSGTAAASSSLVSESVVSLAAGTQAVLRCQSPRMVWTQDRLHDRQR
VVHWDLSGGPGSQRRRLVDMYSAGEQRVYEPRDRDRLLLSPSAFHDGNFSLLIRAVDRGDEGVYTCNLHH
HYCHLDESLAVRLEVTEDPLLSRAYWDGEKEVLVVAHGAPALMTCINRAHVWTDRHLEEAQQVVHWDRQL
PGVSHDRADRLLDLYASGERRAYGPPFLRDRVSVNTNAFARGDFSLRIDELERADEGIYSCHLHHHYCGL
HERRVFHLQVTEPAFEPPARASPGNGSGHSSAPSPDPTLTRGHSIINVIVPEDHTHFFQQLGYVLATLLL
FILLLITVVLATRYRHSGGCKTSDKKAGKSKGKDVNMVEFAVATRDQAPYRTEDIQLDYKNNILKERAEL
AHSPLPAKDVDLDKEFRKEYCK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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