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Report for CCDS31891.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31891.1 Public Homo sapiens 12 ALDH1L2 24 110 108 CCDS HistoryNCBI Gene:160428Re-query CCDS DB by CCDS ID:31891.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31891.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000258494.14 ENSP00000258494.9 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000258494.14Link to Ensembl Protein Viewer:ENSP00000258494.9Re-query CCDS DB by Nucleotide ID:ENST00000258494Re-query CCDS DB by Protein ID:ENSP00000258494
Original member Current member NCBI NM_001034173.4 NP_001029345.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001034173.4Link to Protein Sequence:NP_001029345.2Re-query CCDS DB by Nucleotide ID:NM_001034173Re-query CCDS DB by Protein ID:NP_001029345Link to BLAST:NP_001029345.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001029345.2 923 Q3SY69-1 923 100% 0 0

Chromosomal Locations for CCDS 31891.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 105024424 105024479 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105026545 105026744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105030324 105030429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105031769 105031934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105034300 105034398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105038103 105038202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105039713 105039806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105040607 105040694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105046710 105046815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105046899 105046969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105049908 105050058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105052090 105052217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105052812 105052931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105058073 105058220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105060981 105061072 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105061627 105061752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105062888 105063022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105065267 105065356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105066568 105066669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105068719 105068884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105070570 105070804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105073861 105074005 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 105084389 105084436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2772 nt):
ATGCTGCGGCGGGGCAGCCAGGCGCTCCGGCGCTTCTCCACTGGCCGGGTTTATTTCAAAAACAAGCTGA
AGTTGGCACTAATTGGCCAGAGCCTCTTTGGACAAGAAGTCTATAGCCACCTCCGCAAAGAGGGCCACCG
AGTAGTAGGGGTGTTCACAGTTCCAGACAAGGATGGAAAAGCTGACCCTCTGGCTTTGGCTGCAGAGAAA
GATGGGACCCCTGTGTTCAAGCTTCCTAAATGGAGGGTCAAGGGCAAGACCATCAAAGAAGTGGCAGAAG
CCTACAGATCCGTGGGTGCAGAGCTAAATGTGCTCCCTTTCTGCACTCAGTTCATTCCCATGGATATAAT
TGATAGTCCAAAGCACGGCTCTATCATTTATCACCCATCCATCCTGCCCAGGCACAGAGGAGCCTCTGCT
ATCAATTGGACTCTAATTATGGGAGATAAGAAAGCTGGGTTTTCTGTTTTCTGGGCTGATGATGGCTTGG
ATACAGGACCCATCCTTCTTCAGAGATCATGTGATGTTGAACCCAATGATACAGTGGATGCACTTTATAA
TCGGTTTCTTTTTCCTGAAGGAATCAAGGCCATGGTAGAAGCTGTCCAACTCATAGCTGATGGAAAAGCT
CCTCGTATACCCCAGCCAGAAGAAGGGGCAACATATGAAGGTATCCAGAAAAAGGAAAATGCTGAGATTT
CTTGGGACCAGTCTGCCGAAGTTTTACATAACTGGATTCGAGGTCATGATAAAGTCCCTGGAGCTTGGAC
AGAGATAAATGGACAGATGGTCACTTTCTATGGCTCGACATTACTGAATAGCTCTGTGCCTCCTGGAGAA
CCACTGGAAATTAAAGGTGCCAAGAAGCCTGGTCTCGTTACCAAAAATGGACTTGTTCTTTTTGGTAACG
ATGGAAAAGCACTGACGGTGAGAAATCTGCAGTTTGAAGATGGAAAAATGATCCCTGCCTCTCAGTACTT
TTCAACGGGTGAGACGTCAGTGGTAGAACTGACAGCTGAAGAGGTGAAAGTGGCAGAGACCATCAAGGTC
ATCTGGGCTGGAATTTTAAGCAATGTCCCCATTATTGAAGACTCAACAGACTTCTTTAAATCTGGAGCAA
GCTCAATGGATGTTGCCAGGCTGGTTGAAGAGATCAGACAGAAATGTGGTGGGCTTCAGTTGCAGAATGA
AGATGTCTATATGGCCACCAAGTTTGAAGGCTTTATCCAAAAGGTCGTGAGGAAACTGAGAGGAGAAGAT
CAAGAGGTGGAGCTGGTTGTAGATTATATTTCAAAGGAGGTCAATGAAATCATGGTAAAAATGCCATACC
AGTGTTTCATAAATGGACAGTTCACAGATGCAGACGATGGAAAGACTTACGACACTATCAACCCAACAGA
TGGATCTACAATATGCAAAGTATCCTACGCTTCTTTGGCGGATGTTGATAAAGCAGTAGCAGCAGCAAAA
GATGCTTTTGAAAACGGTGAATGGGGAAGAATGAATGCAAGAGAAAGAGGAAGATTGATGTATAGACTTG
CAGACCTACTGGAAGAGAACCAAGAAGAGCTGGCAACTATTGAAGCCCTTGATTCAGGGGCTGTCTATAC
CTTGGCCCTGAAGACACACATTGGAATGTCTGTGCAAACATTCAGATATTTTGCTGGCTGGTGCGACAAA
ATTCAGGGTTCTACTATTCCAATCAACCAGGCCCGTCCAAATCGCAATCTGACCTTCACCAAGAAAGAGC
CACTCGGTGTCTGTGCCATTATTATTCCCTGGAACTACCCGCTGATGATGCTGGCATGGAAGAGTGCTGC
GTGTTTGGCAGCAGGCAATACCTTAGTGCTCAAGCCAGCACAGGTCACGCCCTTGACTGCTTTGAAGTTT
GCAGAACTGTCTGTGAAAGCAGGCTTTCCAAAGGGGGTCATCAACATCATTCCAGGCTCAGGTGGCATAG
CAGGACAACGTCTGTCTGAACATCCTGACATCCGCAAACTTGGTTTCACTGGATCCACTCCTATTGGCAA
ACAGATCATGAAGAGCTGTGCTGTTAGCAACTTGAAGAAAGTTTCCCTTGAGCTTGGTGGCAAGTCTCCA
CTTATAATATTTAATGACTGTGAACTTGACAAGGCTGTGCGAATGGGCATGGGAGCAGTATTTTTCAACA
AAGGAGAGAACTGTATTGCTGCTGGGCGGTTGTTCGTGGAAGAATCCATCCACGACGAATTTGTGACAAG
AGTGGTAGAAGAAATTAAAAAGATGAAAATTGGTGATCCACTTGACAGATCCACTGATCATGGGCCCCAA
AATCATAAGGCTCATCTGGAAAAGCTGCTGCAATACTGTGAAACTGGAGTGAAAGAAGGGGCCACTTTGG
TGTACGGGGGAAGACAAGTCCAAAGGCCAGGCTTTTTCATGGAGCCGACCGTGTTCACAGATGTGGAAGA
CTACATGTACCTCGCCAAAGAGGAATCCTTTGGGCCTATTATGGTCATTTCTAAATTCCAAAATGGGGAC
ATCGATGGAGTGTTGCAGCGAGCAAATAGTACAGAGTATGGTTTGGCCTCAGGGGTTTTTACAAGAGACA
TAAACAAAGCTATGTATGTGAGTGAAAAACTGGAAGCAGGAACTGTTTTTATTAACACATACAACAAGAC
AGATGTGGCGGCCCCATTTGGCGGAGTTAAACAATCTGGCTTTGGAAAAGACTTAGGTGAGGAAGCTCTA
AATGAATATCTCAAAACCAAGACGGTGACACTGGAATATTAG

Translation (923 aa):
MLRRGSQALRRFSTGRVYFKNKLKLALIGQSLFGQEVYSHLRKEGHRVVGVFTVPDKDGKADPLALAAEK
DGTPVFKLPKWRVKGKTIKEVAEAYRSVGAELNVLPFCTQFIPMDIIDSPKHGSIIYHPSILPRHRGASA
INWTLIMGDKKAGFSVFWADDGLDTGPILLQRSCDVEPNDTVDALYNRFLFPEGIKAMVEAVQLIADGKA
PRIPQPEEGATYEGIQKKENAEISWDQSAEVLHNWIRGHDKVPGAWTEINGQMVTFYGSTLLNSSVPPGE
PLEIKGAKKPGLVTKNGLVLFGNDGKALTVRNLQFEDGKMIPASQYFSTGETSVVELTAEEVKVAETIKV
IWAGILSNVPIIEDSTDFFKSGASSMDVARLVEEIRQKCGGLQLQNEDVYMATKFEGFIQKVVRKLRGED
QEVELVVDYISKEVNEIMVKMPYQCFINGQFTDADDGKTYDTINPTDGSTICKVSYASLADVDKAVAAAK
DAFENGEWGRMNARERGRLMYRLADLLEENQEELATIEALDSGAVYTLALKTHIGMSVQTFRYFAGWCDK
IQGSTIPINQARPNRNLTFTKKEPLGVCAIIIPWNYPLMMLAWKSAACLAAGNTLVLKPAQVTPLTALKF
AELSVKAGFPKGVINIIPGSGGIAGQRLSEHPDIRKLGFTGSTPIGKQIMKSCAVSNLKKVSLELGGKSP
LIIFNDCELDKAVRMGMGAVFFNKGENCIAAGRLFVEESIHDEFVTRVVEEIKKMKIGDPLDRSTDHGPQ
NHKAHLEKLLQYCETGVKEGATLVYGGRQVQRPGFFMEPTVFTDVEDYMYLAKEESFGPIMVISKFQNGD
IDGVLQRANSTEYGLASGVFTRDINKAMYVSEKLEAGTVFINTYNKTDVAAPFGGVKQSGFGKDLGEEAL
NEYLKTKTVTLEY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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