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Report for CCDS81376.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81376.1 Public Homo sapiens 1 PI4KB 24 110 108 CCDS HistoryNCBI Gene:5298Re-query CCDS DB by CCDS ID:81376.1Re-query CCDS DB by GeneID:5298See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81376.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000368873.6 ENSP00000357867.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000368873.6Link to Ensembl Protein Viewer:ENSP00000357867.1Re-query CCDS DB by Nucleotide ID:ENST00000368873Re-query CCDS DB by Protein ID:ENSP00000357867
Original member Current member NCBI NM_001330721.2 NP_001317650.1 Accepted alive Link to Nucleotide Sequence:NM_001330721.2Link to Protein Sequence:NP_001317650.1Re-query CCDS DB by Nucleotide ID:NM_001330721Re-query CCDS DB by Protein ID:NP_001317650Link to BLAST:NP_001317650.1
Original member Current member NCBI NM_001369623.2 NP_001356552.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001369623.2Link to Protein Sequence:NP_001356552.1Re-query CCDS DB by Nucleotide ID:NM_001369623Re-query CCDS DB by Protein ID:NP_001356552Link to BLAST:NP_001356552.1
Original member Current member NCBI NM_001369629.2 NP_001356558.1 Accepted alive Link to Nucleotide Sequence:NM_001369629.2Link to Protein Sequence:NP_001356558.1Re-query CCDS DB by Nucleotide ID:NM_001369629Re-query CCDS DB by Protein ID:NP_001356558Link to BLAST:NP_001356558.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001317650.1 816 Q9UBF8-1 816 100% 0 0
NP_001356552.1 816 Q9UBF8-1 816 100% 0 0
NP_001356558.1 816 Q9UBF8-1 816 100% 0 0

Chromosomal Locations for CCDS 81376.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 151292852 151293033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151294018 151294138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151294409 151294541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151298808 151299073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151301844 151301967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151302194 151302298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151303541 151303650 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151306136 151306363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151307574 151307801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151310211 151310255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 151315573 151316481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2451 nt):
ATGGGAGATACAGTAGTGGAGCCTGCCCCCTTGAAGCCAACTTCTGAGCCCACTTCTGGCCCACCAGGGA
ATAATGGGGGGTCCCTGCTAAGTGTCATCACGGAGGGGGTCGGGGAACTATCAGTGATTGACCCTGAGGT
GGCCCAGAAGGCCTGCCAGGAGGTGTTGGAGAAAGTCAAGCTTTTGCATGGAGGCGTGGCAGTCTCTAGC
AGAGGCACCCCACTGGAGTTGGTCAATGGGGATGGTGTGGACAGTGAGATCCGTTGCCTAGATGATCCAC
CTGCCCAGATCAGGGAGGAGGAAGATGAGATGGGGGCCGCTGTGGCCTCAGGCACAGCCAAAGGAGCAAG
AAGACGGCGGCAGAACAACTCAGCTAAACAGTCTTGGCTGCTGAGGCTGTTTGAGTCAAAACTGTTTGAC
ATCTCCATGGCCATTTCATACCTGTATAACTCCAAGGAGCCTGGAGTACAAGCCTACATTGGCAACCGGC
TCTTCTGCTTTCGCAACGAGGACGTGGACTTCTATCTGCCCCAGTTGCTTAACATGTACATCCACATGGA
TGAGGACGTGGGTGATGCCATTAAGCCCTACATAGTCCACCGTTGCCGCCAGAGCATTAACTTTTCCCTC
CAGTGTGCCCTGTTGCTTGGGGCCTATTCTTCAGACATGCACATTTCCACTCAACGACACTCCCGTGGGA
CCAAGCTACGGAAGCTGATCCTCTCAGATGAGCTAAAGCCAGCTCACAGGAAGAGGGAGCTGCCCTCCTT
GAGCCCGGCCCCTGACACAGGGCTGTCTCCCTCCAAAAGGACTCACCAGCGCTCTAAGTCAGATGCCACT
GCCAGCATAAGTCTCAGCAGCAACCTGAAACGAACAGCCAGCAACCCTAAAGTGGAGAATGAGGATGAGG
AGCTCTCCTCCAGCACCGAGAGTATTGATAATTCATTCAGTTCCCCTGTTCGACTGGCTCCTGAGAGAGA
ATTCATCAAGTCCCTGATGGCGATCGGCAAGCGGCTGGCCACGCTCCCCACCAAAGAGCAGAAAACACAG
AGGCTGATCTCAGAGCTCTCCCTGCTCAACCATAAGCTCCCTGCCCGAGTCTGGCTGCCCACTGCTGGCT
TTGACCACCACGTGGTCCGTGTACCCCACACACAGGCTGTTGTCCTCAACTCCAAGGACAAGGCTCCCTA
CCTGATTTATGTGGAAGTCCTTGAATGTGAAAACTTTGACACCACCAGTGTCCCTGCCCGGATCCCCGAG
AACCGAATTCGGAGTACGAGGTCCGTAGAAAACTTGCCCGAATGTGGTATTACCCATGAGCAGCGAGCTG
GCAGCTTCAGCACTGTGCCCAACTATGACAACGATGATGAGGCCTGGTCGGTGGATGACATAGGCGAGCT
GCAAGTGGAGCTCCCCGAAGTGCATACCAACAGCTGTGACAACATCTCCCAGTTCTCTGTGGACAGCATC
ACCAGCCAGGAGAGCAAGGAGCCTGTGTTCATTGCAGCAGGGGACATCCGCCGGCGCCTTTCGGAACAGC
TGGCTCATACCCCGACAGCCTTCAAACGAGACCCAGAAGATCCTTCTGCAGTTGCTCTCAAAGAGCCCTG
GCAGGAGAAAGTACGGCGGATCAGAGAGGGCTCCCCCTACGGCCATCTCCCCAATTGGCGGCTCCTGTCA
GTCATTGTCAAGTGTGGGGATGACCTTCGGCAAGAGCTTCTGGCCTTTCAGGTGTTGAAGCAACTGCAGT
CCATTTGGGAACAGGAGCGAGTGCCCCTTTGGATCAAGCCATACAAGATTCTTGTGATTTCGGCTGATAG
TGGCATGATTGAACCAGTGGTCAATGCTGTGTCCATCCATCAGGTGAAGAAACAGTCACAGCTCTCCTTG
CTCGATTACTTCCTACAGGAGCACGGCAGTTACACCACTGAGGCATTCCTCAGTGCACAGCGCAATTTTG
TGCAAAGTTGTGCTGGGTACTGCTTGGTCTGCTACCTGCTGCAAGTCAAGGACAGACACAATGGGAATAT
CCTTTTGGACGCAGAAGGCCACATCATCCACATCGACTTTGGCTTCATCCTCTCCAGCTCACCCCGAAAT
CTGGGCTTTGAGACGTCAGCCTTTAAGCTGACCACAGAGTTTGTGGATGTGATGGGCGGCCTGGATGGCG
ACATGTTCAACTACTATAAGATGCTGATGCTGCAAGGGCTGATTGCCGCTCGGAAACACATGGACAAGGT
GGTGCAGATCGTGGAGATCATGCAGCAAGGTTCTCAGCTTCCTTGCTTCCATGGCTCCAGCACCATTCGA
AACCTCAAAGAGAGGTTCCACATGAGCATGACTGAGGAGCAGCTGCAGCTGCTGGTGGAGCAGATGGTGG
ATGGCAGTATGCGGTCTATCACCACCAAACTCTATGACGGCTTCCAGTACCTCACCAACGGCATCATGTG
A

Translation (816 aa):
MGDTVVEPAPLKPTSEPTSGPPGNNGGSLLSVITEGVGELSVIDPEVAQKACQEVLEKVKLLHGGVAVSS
RGTPLELVNGDGVDSEIRCLDDPPAQIREEEDEMGAAVASGTAKGARRRRQNNSAKQSWLLRLFESKLFD
ISMAISYLYNSKEPGVQAYIGNRLFCFRNEDVDFYLPQLLNMYIHMDEDVGDAIKPYIVHRCRQSINFSL
QCALLLGAYSSDMHISTQRHSRGTKLRKLILSDELKPAHRKRELPSLSPAPDTGLSPSKRTHQRSKSDAT
ASISLSSNLKRTASNPKVENEDEELSSSTESIDNSFSSPVRLAPEREFIKSLMAIGKRLATLPTKEQKTQ
RLISELSLLNHKLPARVWLPTAGFDHHVVRVPHTQAVVLNSKDKAPYLIYVEVLECENFDTTSVPARIPE
NRIRSTRSVENLPECGITHEQRAGSFSTVPNYDNDDEAWSVDDIGELQVELPEVHTNSCDNISQFSVDSI
TSQESKEPVFIAAGDIRRRLSEQLAHTPTAFKRDPEDPSAVALKEPWQEKVRRIREGSPYGHLPNWRLLS
VIVKCGDDLRQELLAFQVLKQLQSIWEQERVPLWIKPYKILVISADSGMIEPVVNAVSIHQVKKQSQLSL
LDYFLQEHGSYTTEAFLSAQRNFVQSCAGYCLVCYLLQVKDRHNGNILLDAEGHIIHIDFGFILSSSPRN
LGFETSAFKLTTEFVDVMGGLDGDMFNYYKMLMLQGLIAARKHMDKVVQIVEIMQQGSQLPCFHGSSTIR
NLKERFHMSMTEEQLQLLVEQMVDGSMRSITTKLYDGFQYLTNGIM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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