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Report for CCDS10098.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10098.1 Public Homo sapiens 15 STRC 24 110 108 CCDS HistoryNCBI Gene:161497Re-query CCDS DB by CCDS ID:10098.1See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10098.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000450892.7 ENSP00000401513.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000450892.7Link to Ensembl Protein Viewer:ENSP00000401513.2Re-query CCDS DB by Nucleotide ID:ENST00000450892Re-query CCDS DB by Protein ID:ENSP00000401513
Original member Current member NCBI NM_153700.2 NP_714544.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153700.2Link to Protein Sequence:NP_714544.1Re-query CCDS DB by Nucleotide ID:NM_153700Re-query CCDS DB by Protein ID:NP_714544Link to BLAST:NP_714544.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_714544.1 1775 Q7RTU9 1775 100% 0 0

Chromosomal Locations for CCDS 10098.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 43599672 43599760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43599960 43600107 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43600196 43600293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43600534 43600682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43600872 43601014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43601396 43601551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43603242 43603411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43603996 43604152 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43604361 43604451 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43604650 43604846 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43605264 43605399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43607863 43607975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43608080 43608203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43609276 43609334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43610312 43610437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43610919 43610984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43611148 43611315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43611499 43611537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43611842 43612024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43612377 43612509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43612791 43612906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43613045 43613231 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43613887 43614053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43614196 43614312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43614414 43614476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43615433 43616690 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43617458 43617482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43617571 43618356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 43618659 43618722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5328 nt):
ATGGCTCTCAGCCTCTGGCCCCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTCCTTTGCAGTGACTC
TGGCCCCTACTGGGCCTCATTCCCTGGACCCTGGTCTCTCCTTCCTGAAGTCATTGCTCTCCACTCTGGA
CCAGGCTCCCCAGGGCTCCCTGAGCCGCTCACGGTTCTTTACATTCCTGGCCAACATTTCTTCTTCCTTT
GAGCCTGGGAGAATGGGGGAAGGACCAGTAGGAGAGCCCCCACCTCTCCAGCCGCCTGCTCTGCGGCTCC
ATGATTTTCTAGTGACACTGAGAGGTAGCCCCGACTGGGAGCCAATGCTAGGGCTGCTAGGGGATATGCT
GGCACTGCTGGGACAGGAGCAGACTCCCCGAGATTTCCTGGTGCACCAGGCAGGGGTGCTGGGTGGACTT
GTGGAGGTGCTGCTGGGAGCCTTAGTTCCTGGGGGCCCCCCTACCCCAACTCGGCCCCCATGCACCCGTG
ATGGGCCGTCTGACTGTGTCCTGGCTGCTGACTGGTTGCCTTCTCTGCTGCTGTTGTTAGAGGGCACACG
CTGGCAAGCTCTGGTGCAGGTGCAGCCCAGTGTGGACCCCACCAATGCCACAGGCCTCGATGGGAGGGAG
GCAGCTCCTCACTTTTTGCAGGGTCTGTTGGGTTTGCTTACCCCAACAGGGGAGCTAGGCTCCAAGGAGG
CTCTTTGGGGCGGTCTGCTACGCACAGTGGGGGCCCCCCTCTATGCTGCCTTTCAGGAGGGGCTGCTCCG
TGTCACTCACTCCCTGCAGGATGAGGTCTTCTCCATTTTGGGGCAGCCAGAGCCTGATACCAATGGGCAG
TGCCAGGGAGGTAACCTTCAACAGCTGCTCTTATGGGGCGTCCGGCACAACCTTTCCTGGGATGTCCAGG
CGCTGGGCTTTCTGTCTGGATCACCACCCCCACCCCCTGCCCTCCTTCACTGCCTGAGCACGGGCGTGCC
TCTGCCCAGAGCTTCTCAGCCGTCAGCCCACATCAGCCCACGCCAACGGCGAGCCATCACTGTGGAGGCC
CTCTGTGAGAACCACTTAGGCCCAGCACCACCCTACAGCATTTCCAACTTCTCCATCCACTTGCTCTGCC
AGCACACCAAGCCTGCCACTCCACAGCCCCATCCCAGCACCACTGCCATCTGCCAGACAGCTGTGTGGTA
TGCAGTGTCCTGGGCACCAGGTGCCCAAGGCTGGCTACAGGCCTGCCACGACCAGTTTCCTGATGAGTTT
TTGGATGCGATCTGCAGTAACCTCTCCTTTTCAGCCCTGTCTGGCTCCAACCGCCGCCTGGTGAAGCGGC
TCTGTGCTGGCCTGCTCCCACCCCCTACCAGCTGCCCTGAAGGCCTGCCCCCTGTTCCCCTCACCCCAGA
CATCTTTTGGGGCTGCTTCTTGGAGAATGAGACTCTGTGGGCTGAGCGACTGTGTGGGGAGGCAAGTCTA
CAGGCTGTGCCCCCCAGCAACCAGGCTTGGGTCCAGCATGTGTGCCAGGGCCCCACCCCAGATGTCACTG
CCTCCCCACCATGCCACATTGGACCCTGTGGGGAACGCTGCCCGGATGGGGGCAGCTTCCTGGTGATGGT
CTGTGCCAATGACACCATGTATGAGGTCCTGGTGCCCTTCTGGCCTTGGCTAGCAGGCCAATGCAGGATA
AGTCGTGGGGGCAATGACACTTGCTTCCTAGAAGGGCTGCTGGGCCCCCTTCTGCCCTCTCTGCCACCAC
TGGGACCATCCCCACTCTGTCTGACCCCTGGCCCCTTCCTCCTTGGCATGCTATCCCAGTTGCCACGCTG
TCAGTCCTCTGTCCCAGCTCTTGCTCACCCCACACGCCTACACTATCTCCTCCGCCTGCTGACCTTCCTC
TTGGGTCCAGGGGCTGGGGGCGCTGAGGCCCAGGGGATGCTGGGTCGGGCCCTACTGCTCTCCAGTCTCC
CAGACAACTGCTCCTTCTGGGATGCCTTTCGCCCAGAGGGCCGGCGCAGTGTGCTACGGACGATTGGGGA
ATACCTGGAACAAGATGAGGAGCAGCCAACCCCATCAGGCTTTGAACCCACTGTCAACCCCAGCTCTGGT
ATAAGCAAGATGGAGCTGCTGGCCTGCTTTAGTCCTGTGCTGTGGGATCTGCTCCAGAGGGAAAAGAGTG
TTTGGGCCCTGCAGATTCTAGTGCAGGCGTACCTGCATATGCCCCCAGAAAACCTCCAGCAGCTGGTGCT
TTCAGCAGAGAGGGAGGCTGCACAGGGCTTCCTGACACTCATGCTGCAGGGGAAGCTGCAGGGGAAGCTG
CAGGTACCACCATCCGAGGAGCAGGCCCTGGGTCGCCTGACAGCCCTGCTGCTCCAGCGGTACCCACGCC
TCACCTCCCAGCTCTTCATTGACCTGTCACCACTCATCCCTTTCTTGGCTGTCTCTGACCTGATGCGCTT
CCCACCATCCCTGTTAGCCAACGACAGTGTCCTGGCTGCCATCCGGGATTACAGCCCAGGAATGAGGCCT
GAACAGAAGGAGGCTCTGGCAAAGCGACTGCTGGCCCCTGAACTGTTTGGGGAAGTGCCTGCCTGGCCCC
AGGAGCTGCTGTGGGCAGTGCTGCCCCTGCTCCCCCACCTCCCTCTGGAGAACTTTTTGCAGCTCAGCCC
TCACCAGATCCAGGCCCTGGAGGATAGCTGGCCAGCAGCAGGTCTGGGGCCAGGGCATGCCCGCCATGTG
CTGCGCAGCCTGGTAAACCAGAGTGTCCAGGATGGTGAGGAGCAGGTACGCAGGCTTGGGCCCCTCGCCT
GTTTCCTGAGCCCTGAGGAGCTGCAGAGCCTAGTGCCCCTGAGTGATCCAACGGGGCCAGTAGAACGGGG
GCTGCTGGAATGTGCAGCCAATGGGACCCTCAGCCCAGAAGGACGGGTGGCATATGAACTTCTGGGTGTG
TTGCGCTCATCTGGAGGAGCGGTGCTGAGCCCCCGGGAGCTGCGGGTCTGGGCCCCTCTCTTCTCTCAGC
TGGGCCTCCGCTTCCTTCAGGAGCTGTCAGAGCCCCAGCTTAGAGCCATGCTTCCTGTCCTGCAGGGAAC
TAGTGTTACACCTGCTCAGGCTGTCCTGCTGCTTGGACGGCTCCTTCCTAGGCACGATCTATCCCTGGAG
GAACTCTGCTCCTTGCACCTTCTGCTACCAGGCCTCAGCCCCCAGACACTCCAGGCCATCCCTAGGCGAG
TCCTGGTCGGGGCTTGTTCCTGCCTGGCCCCTGAACTGTCACGCCTCTCAGCCTGCCAGACCGCAGCACT
GCTGCAGACCTTTCGGGTTAAAGATGGTGTTAAAAATATGGGTACAACAGGTGCTGGTCCAGCTGTGTGT
ATCCCTGGTCAGCCTATTCCCACCACCTGGCCAGACTGCCTGCTTCCCCTGCTCCCATTAAAGCTGCTAC
AACTGGATTCCTTGGCTCTTCTGGCAAATCGAAGACGCTACTGGGAGCTGCCCTGGTCTGAGCAGCAGGC
ACAGTTTCTCTGGAAGAAGATGCAAGTACCCACCAACCTTACCCTCAGGAATCTGCAGGCTCTGGGCACC
CTGGCAGGAGGCATGTCCTGTGAGTTTCTGCAGCAGATCAACTCCATGGTAGACTTCCTTGAAGTGGTGC
ACATGATCTATCAGCTGCCCACTAGAGTTCGAGGGAGCCTGAGGGCCTGTATCTGGGCAGAGCTACAGCG
GAGGATGGCAATGCCAGAACCAGAATGGACAACTGTAGGGCCAGAACTGAACGGGCTGGATAGCAAGCTA
CTCCTGGACTTACCGATCCAGTTGATGGACAGACTATCCAATGAATCCATTATGTTGGTGGTGGAGCTGG
TGCAAAGAGCTCCAGAGCAGCTGCTGGCACTGACCCCCCTCCACCAGGCAGCCCTGGCAGAGAGGGCACT
ACAAAACCTGGCTCCAAAGGAGACTCCAGTCTCAGGGGAAGTGCTGGAGACCTTAGGCCCTTTGGTTGGA
TTCCTGGGGACAGAGAGCACACGACAGATCCCCCTACAGATCCTGCTGTCCCATCTCAGTCAGCTGCAAG
GCTTCTGCCTAGGAGAGACATTTGCCACAGAGCTGGGATGGCTGCTATTGCAGGAGTCTGTTCTTGGGAA
ACCAGAGTTGTGGAGCCAGGATGAAGTAGAGCAAGCTGGACGCCTAGTATTCACTCTGTCTACTGAGGCA
ATTTCCTTGATCCCCAGGGAGGCCTTGGGTCCAGAGACCCTGGAGCGGCTTCTAGAAAAGCAGCAGAGCT
GGGAGCAGAGCAGAGTTGGACAGCTGTGTAGGGAGCCACAGCTTGCTGCCAAGAAAGCAGCCCTGGTAGC
AGGGGTGGTGCGACCAGCTGCTGAGGATCTTCCAGAACCTGTGCCAAATTGTGCAGATGTACGAGGGACA
TTCCCAGCAGCCTGGTCTGCAACCCAGATTGCAGAGATGGAGCTCTCAGACTTTGAGGACTGCCTGACAT
TATTTGCAGGAGACCCAGGACTTGGGCCTGAGGAACTGCGGGCAGCCATGGGCAAAGCAAAACAGTTGTG
GGGTCCCCCCCGGGGATTTCGTCCTGAGCAGATCCTGCAGCTTGGTAGGCTCTTAATAGGTCTAGGAGAT
CGGGAACTACAGGAGCTGATCCTAGTGGACTGGGGAGTGCTGAGCACCCTGGGGCAGATAGATGGCTGGA
GCACCACTCAGCTCCGCATTGTGGTCTCCAGTTTCCTACGGCAGAGTGGTCGGCATGTGAGCCACCTGGA
CTTCGTTCATCTGACAGCGCTGGGTTATACTCTCTGTGGACTGCGGCCAGAGGAGCTCCAGCACATCAGC
AGTTGGGAGTTCAGCCAAGCAGCTCTCTTCCTCGGCACCCTGCATCTCCAGTGCTCTGAGGAACAACTGG
AGGTTCTGGCCCACCTACTTGTACTGCCTGGTGGGTTTGGCCCAATCAGTAACTGGGGGCCTGAGATCTT
CACTGAAATTGGCACCATAGCAGCTGGGATCCCAGACCTGGCTCTTTCAGCACTGCTGCGGGGACAGATC
CAGGGCGTTACTCCTCTTGCCATTTCTGTCATCCCTCCTCCTAAATTTGCTGTGGTGTTTAGTCCCATCC
AACTATCTAGTCTCACCAGTGCTCAGGCTGTGGCTGTCACTCCTGAGCAAATGGCCTTTCTGAGTCCTGA
GCAGCGACGAGCAGTTGCATGGGCCCAACATGAGGGAAAGGAGAGCCCAGAACAGCAAGGTCGAAGTACA
GCCTGGGGCCTCCAGGACTGGTCACGACCTTCCTGGTCCCTGGTATTGACTATCAGCTTCCTTGGCCACC
TGCTATGA

Translation (1775 aa):
MALSLWPLLLLLLLLLLLSFAVTLAPTGPHSLDPGLSFLKSLLSTLDQAPQGSLSRSRFFTFLANISSSF
EPGRMGEGPVGEPPPLQPPALRLHDFLVTLRGSPDWEPMLGLLGDMLALLGQEQTPRDFLVHQAGVLGGL
VEVLLGALVPGGPPTPTRPPCTRDGPSDCVLAADWLPSLLLLLEGTRWQALVQVQPSVDPTNATGLDGRE
AAPHFLQGLLGLLTPTGELGSKEALWGGLLRTVGAPLYAAFQEGLLRVTHSLQDEVFSILGQPEPDTNGQ
CQGGNLQQLLLWGVRHNLSWDVQALGFLSGSPPPPPALLHCLSTGVPLPRASQPSAHISPRQRRAITVEA
LCENHLGPAPPYSISNFSIHLLCQHTKPATPQPHPSTTAICQTAVWYAVSWAPGAQGWLQACHDQFPDEF
LDAICSNLSFSALSGSNRRLVKRLCAGLLPPPTSCPEGLPPVPLTPDIFWGCFLENETLWAERLCGEASL
QAVPPSNQAWVQHVCQGPTPDVTASPPCHIGPCGERCPDGGSFLVMVCANDTMYEVLVPFWPWLAGQCRI
SRGGNDTCFLEGLLGPLLPSLPPLGPSPLCLTPGPFLLGMLSQLPRCQSSVPALAHPTRLHYLLRLLTFL
LGPGAGGAEAQGMLGRALLLSSLPDNCSFWDAFRPEGRRSVLRTIGEYLEQDEEQPTPSGFEPTVNPSSG
ISKMELLACFSPVLWDLLQREKSVWALQILVQAYLHMPPENLQQLVLSAEREAAQGFLTLMLQGKLQGKL
QVPPSEEQALGRLTALLLQRYPRLTSQLFIDLSPLIPFLAVSDLMRFPPSLLANDSVLAAIRDYSPGMRP
EQKEALAKRLLAPELFGEVPAWPQELLWAVLPLLPHLPLENFLQLSPHQIQALEDSWPAAGLGPGHARHV
LRSLVNQSVQDGEEQVRRLGPLACFLSPEELQSLVPLSDPTGPVERGLLECAANGTLSPEGRVAYELLGV
LRSSGGAVLSPRELRVWAPLFSQLGLRFLQELSEPQLRAMLPVLQGTSVTPAQAVLLLGRLLPRHDLSLE
ELCSLHLLLPGLSPQTLQAIPRRVLVGACSCLAPELSRLSACQTAALLQTFRVKDGVKNMGTTGAGPAVC
IPGQPIPTTWPDCLLPLLPLKLLQLDSLALLANRRRYWELPWSEQQAQFLWKKMQVPTNLTLRNLQALGT
LAGGMSCEFLQQINSMVDFLEVVHMIYQLPTRVRGSLRACIWAELQRRMAMPEPEWTTVGPELNGLDSKL
LLDLPIQLMDRLSNESIMLVVELVQRAPEQLLALTPLHQAALAERALQNLAPKETPVSGEVLETLGPLVG
FLGTESTRQIPLQILLSHLSQLQGFCLGETFATELGWLLLQESVLGKPELWSQDEVEQAGRLVFTLSTEA
ISLIPREALGPETLERLLEKQQSWEQSRVGQLCREPQLAAKKAALVAGVVRPAAEDLPEPVPNCADVRGT
FPAAWSATQIAEMELSDFEDCLTLFAGDPGLGPEELRAAMGKAKQLWGPPRGFRPEQILQLGRLLIGLGD
RELQELILVDWGVLSTLGQIDGWSTTQLRIVVSSFLRQSGRHVSHLDFVHLTALGYTLCGLRPEELQHIS
SWEFSQAALFLGTLHLQCSEEQLEVLAHLLVLPGGFGPISNWGPEIFTEIGTIAAGIPDLALSALLRGQI
QGVTPLAISVIPPPKFAVVFSPIQLSSLTSAQAVAVTPEQMAFLSPEQRRAVAWAQHEGKESPEQQGRST
AWGLQDWSRPSWSLVLTISFLGHLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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