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Report for CCDS12653.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12653.1 Public Homo sapiens 19 ZNF296 24 110 108 CCDS HistoryNCBI Gene:162979Re-query CCDS DB by CCDS ID:12653.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12653.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000303809.7 ENSP00000302770.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000303809.7Link to Ensembl Protein Viewer:ENSP00000302770.1Re-query CCDS DB by Nucleotide ID:ENST00000303809Re-query CCDS DB by Protein ID:ENSP00000302770
Original member Current member NCBI NM_145288.3 NP_660331.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_145288.3Link to Protein Sequence:NP_660331.1Re-query CCDS DB by Nucleotide ID:NM_145288Re-query CCDS DB by Protein ID:NP_660331Link to BLAST:NP_660331.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_660331.1 475 Q8WUU4 475 100% 0 0

Chromosomal Locations for CCDS 12653.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 45071601 45072580 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45075713 45075862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45076076 45076373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1428 nt):
ATGTCCCGCCGCAAGGCCGGCAGCGCGCCCCGCCGAGTAGAGCCCGCGCCCGCCGCCAACCCAGACGACG
AGATGGAAATGCAGGACCTCGTCATCGAACTCAAGCCCGAGCCAGACGCGCAGCCCCAACAGGCCCCAAG
GCTGGGGCCCTTCTCCCCGAAGGAGGTGTCCTCGGCGGGGCGGTTCGGCGGCGAACCCCACCACTCCCCT
GGCCCCATGCCCGCCGGGGCCGCCCTCCTCGCCCTCGGCCCGCGGAACCCGTGGACCCTGTGGACGCCGT
TGACCCCGAACTATCCCGACCGCCAGCCCTGGACCGACAAACACCCAGATCTGTTGACCTGCGGCCGCTG
CCTGCAGACCTTCCCGTTGGAGGCCATCACTGCCTTCATGGACCACAAGAAGCTGGGCTGTCAGCTCTTC
AGAGGCCCCAGCCGCGGCCAGGGCTCAGAACGAGAGGAGCTGAAGGCCTTGAGCTGCCTGCGCTGTGGCA
AACAGTTCACAGTGGCCTGGAAGCTGCTGCGTCACGCCCAGTGGGACCACGGACTGTCCATCTACCAGAC
AGAATCAGAGGCCCCGGAGGCCCCGCTCCTGGGCCTGGCCGAGGTGGCTGCAGCCGTGTCGGCAGTGGTG
GGGCCAGCAGCTGAGGCCAAGAGCCCCCGTGCAAGTGGCAGCGGCCTCACCCGGCGGAGCCCCACCTGTC
CTGTGTGCAAGAAGACCCTCAGCTCCTTCAGCAACCTCAAAGTGCACATGCGCTCACACACAGGCGAGCG
GCCCTATGCTTGCGACCAGTGTCCCTACGCCTGCGCCCAGAGCAGCAAGCTCAACCGCCACAAGAAGACC
CACCGGCAGGTGCCGCCCCAGAGCCCCCTCATGGCCGACACCAGCCAGGAGCAGGCCTCTGCAGCCCCTC
CGGAGCCGGCTGTCCATGCTGCTGCCCCCACCAGCACCCTTCCATGCAGCGGTGGTGAGGGGGCTGGAGC
CGCCGCCACAGCAGGTGTCCAGGAACCCGGGGCTCCTGGCAGTGGGGCTCAAGCCGGCCCTGGTGGAGAC
ACTTGGGGAGCCATCACCACGGAACAAAGAACTGACCCTGCAAACAGCCAGAAGGCATCACCCAAAAAGA
TGCCCAAGTCAGGGGGCAAGAGCCGCGGGCCCGGGGGCAGCTGTGAGTTCTGCGGGAAGCATTTTACCAA
CAGCAGCAACCTGACGGTGCACCGGCGCTCACACACCGGGGAGCGCCCCTACACCTGTGAGTTCTGCAAC
TACGCCTGCGCCCAGAGCAGTAAGCTCAACCGCCACCGCCGCATGCACGGCATGACGCCTGGCAGCACCC
GCTTCGAGTGCCCCCACTGCCATGTGCCCTTCGGCCTGCGAGCCACCCTGGACAAACACCTGCGGCAGAA
GCACCCTGAGGCGGCCGGCGAGGCCTGA

Translation (475 aa):
MSRRKAGSAPRRVEPAPAANPDDEMEMQDLVIELKPEPDAQPQQAPRLGPFSPKEVSSAGRFGGEPHHSP
GPMPAGAALLALGPRNPWTLWTPLTPNYPDRQPWTDKHPDLLTCGRCLQTFPLEAITAFMDHKKLGCQLF
RGPSRGQGSEREELKALSCLRCGKQFTVAWKLLRHAQWDHGLSIYQTESEAPEAPLLGLAEVAAAVSAVV
GPAAEAKSPRASGSGLTRRSPTCPVCKKTLSSFSNLKVHMRSHTGERPYACDQCPYACAQSSKLNRHKKT
HRQVPPQSPLMADTSQEQASAAPPEPAVHAAAPTSTLPCSGGEGAGAAATAGVQEPGAPGSGAQAGPGGD
TWGAITTEQRTDPANSQKASPKKMPKSGGKSRGPGGSCEFCGKHFTNSSNLTVHRRSHTGERPYTCEFCN
YACAQSSKLNRHRRMHGMTPGSTRFECPHCHVPFGLRATLDKHLRQKHPEAAGEA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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