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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS54258.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
54258.1 |
Public |
Homo sapiens |
19 |
ZNF540 |
24 |
110 |
108 |
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Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 54258.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENST00000589117.5 |
ENSP00000467118.1 |
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Accepted |
alive |
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NCBI |
NM_001172226.3 |
NP_001165697.1 |
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Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001165697.1 |
628 |
Q8NDQ6-2 |
628 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 54258.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1887 nt): ATGGCCCATGCATTGGTGACGTTCAGGGATGTGGCTATAGACTTCTCTCAGAAGGAATGGGAGTGCCTGG ACACTACCCAGAGGAAATTGTACAGAGATGTGATGTTGGAGAATTATAATAACTTGGTCTCACTGGGTTT GTTATCCAGGCATAAGACCAAGAAATTATCTTCAGAAAAGGACATTCATGAAATCAGTTTATCCAAAGAG AGTATAATAGAAAAAAGTAAAACTCTTCGTCTGAAAGGATCCATTTTTAGAAATGAGTGGCAGAACAAAA GTGAGTTTGAGGGTCAACAGGGACTTAAAGAAAGATCTATCAGTCAAAAGAAAATCGTCTCTAAAAAAAT GTCAACTGATAGAAAACGTCCCTCTTTTACTCTGAATCAGAGAATTCACAATAGTGAGAAAAGCTGTGAC TCACACTTGGTTCAACATGGGAAAATAGATTCTGATGTGAAACATGATTGTAAAGAATGTGGGAGTACTT TTAATAATGTCTATCAGCTTACTCTCCATCAGAAAATTCATACTGGTGAAAAATCCTGTAAATGTGAGAA ATGTGGGAAAGTTTTTAGTCATAGCTATCAACTTACTCTGCATCAGAGATTTCATACTGGTGAGAAACCC TATGAATGTCAAGAATGTGGGAAGACCTTTACTCTTTACCCACAACTTAATCGACATCAGAAAATTCACA CTGGTAAAAAACCCTATATGTGTAAGAAATGTGATAAGGGTTTTTTTAGTAGATTAGAACTTACTCAACA TAAAAGAATTCATACTGGTAAGAAATCTTATGAATGTAAAGAATGTGGAAAAGTTTTTCAACTTATTTTC TACTTTAAAGAACATGAGAGAATTCATACAGGTAAGAAACCCTATGAATGTAAGGAGTGTGGGAAAGCTT TTAGTGTATGCGGACAACTTACCCGTCATCAGAAAATTCATACTGGTGTAAAACCCTACGAATGTAAGGA ATGTGGAAAGACCTTTAGACTTAGTTTTTACCTTACTGAACACAGAAGAACTCATGCAGGTAAGAAACCT TATGAATGTAAGGAGTGTGGGAAATCATTTAATGTGCGTGGACAGCTTAATCGGCATAAAACAATCCATA CTGGTATAAAACCTTTTGCATGTAAGGTGTGTGAGAAGGCTTTTAGTTATAGTGGTGACCTCAGAGTACA TTCTAGAATTCATACTGGAGAGAAACCATATGAATGTAAGGAATGCGGGAAAGCCTTTATGCTTCGTTCA GTCCTTACTGAACATCAGAGACTTCATACTGGTGTGAAGCCCTACGAATGTAAGGAATGTGGGAAGACCT TTCGAGTTCGTTCTCAAATTAGTCTACATAAGAAAATTCATACTGATGTGAAGCCCTACAAATGTGTACG ATGTGGGAAGACCTTTAGATTTGGTTTCTACCTTACTGAACACCAGAGAATTCACACTGGTGAAAAGCCC TATAAATGTAAAGAATGTGGAAAGGCCTTTATTCGTAGAGGGAATCTTAAAGAACATCTGAAAATTCATT CTGGTTTAAAACCCTATGACTGTAAAGAATGTGGGAAGTCCTTTAGTCGGCGTGGGCAGTTCACTGAACA TCAGAAAATTCATACGGGTGTAAAACCATACAAATGTAAAGAATGTGGGAAGGCCTTTAGTCGTAGTGTA GACCTTAGAATACATCAAAGAATTCATACTGGTGAGAAACCCTATGAGTGTAAACAATGTGGGAAGGCCT TTAGACTTAATTCACACCTTACTGAACATCAGAGAATTCACACTGGTGAGAAACCCTATGAGTGTAAGGT ATGTAGAAAGGCCTTTAGACAATATTCACATCTTTATCAACATCAGAAAACTCATAATGTAATTTAA
Translation (628 aa): MAHALVTFRDVAIDFSQKEWECLDTTQRKLYRDVMLENYNNLVSLGLLSRHKTKKLSSEKDIHEISLSKE SIIEKSKTLRLKGSIFRNEWQNKSEFEGQQGLKERSISQKKIVSKKMSTDRKRPSFTLNQRIHNSEKSCD SHLVQHGKIDSDVKHDCKECGSTFNNVYQLTLHQKIHTGEKSCKCEKCGKVFSHSYQLTLHQRFHTGEKP YECQECGKTFTLYPQLNRHQKIHTGKKPYMCKKCDKGFFSRLELTQHKRIHTGKKSYECKECGKVFQLIF YFKEHERIHTGKKPYECKECGKAFSVCGQLTRHQKIHTGVKPYECKECGKTFRLSFYLTEHRRTHAGKKP YECKECGKSFNVRGQLNRHKTIHTGIKPFACKVCEKAFSYSGDLRVHSRIHTGEKPYECKECGKAFMLRS VLTEHQRLHTGVKPYECKECGKTFRVRSQISLHKKIHTDVKPYKCVRCGKTFRFGFYLTEHQRIHTGEKP YKCKECGKAFIRRGNLKEHLKIHSGLKPYDCKECGKSFSRRGQFTEHQKIHTGVKPYKCKECGKAFSRSV DLRIHQRIHTGEKPYECKQCGKAFRLNSHLTEHQRIHTGEKPYECKVCRKAFRQYSHLYQHQKTHNVI
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