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Report for CCDS723.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
723.1 Public Homo sapiens 1 GBP6 24 110 108 CCDS HistoryNCBI Gene:163351Re-query CCDS DB by CCDS ID:723.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 723.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000370456.5 ENSP00000359485.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000370456.5Link to Ensembl Protein Viewer:ENSP00000359485.5Re-query CCDS DB by Nucleotide ID:ENST00000370456Re-query CCDS DB by Protein ID:ENSP00000359485
Original member Current member NCBI NM_198460.3 NP_940862.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198460.3Link to Protein Sequence:NP_940862.2Re-query CCDS DB by Nucleotide ID:NM_198460Re-query CCDS DB by Protein ID:NP_940862Link to BLAST:NP_940862.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_940862.2 633 Q6ZN66-1 633 100% 0 0

Chromosomal Locations for CCDS 723.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 89368552 89368741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 89369546 89369673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 89378103 89378212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 89378417 89378613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 89380386 89380631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 89381694 89381974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 89382664 89382876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 89383652 89383754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 89384093 89384286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 89385230 89385469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1902 nt):
ATGGAATCTGGACCCAAAATGTTGGCCCCCGTTTGCCTGGTGGAAAATAACAATGAGCAGCTATTGGTGA
ACCAGCAAGCTATACAGATTCTTGAAAAGATTTCTCAGCCAGTGGTGGTGGTGGCCATTGTAGGACTGTA
CCGTACAGGGAAATCCTACTTGATGAACCATCTGGCAGGACAGAATCATGGCTTCCCTCTGGGCTCCACG
GTGCAGTCTGAAACCAAGGGCATCTGGATGTGGTGCGTGCCCCACCCATCCAAGCCAAACCACACCCTGG
TCCTTCTGGACACCGAAGGTCTGGGCGATGTGGAAAAGGGTGACCCTAAGAATGACTCCTGGATCTTTGC
CCTGGCTGTGCTCCTGTGCAGCACCTTTGTCTACAACAGCATGAGCACCATCAACCACCAGGCCCTGGAG
CAGCTGCATTATGTGACGGAGCTCACAGAACTAATTAAGGCAAAGTCCTCCCCAAGGCCTGATGGAGTAG
AAGATTCCACAGAGTTTGTGAGTTTCTTCCCAGACTTTCTTTGGACAGTACGGGATTTCACTCTGGAGCT
GAAGTTGAACGGTCACCCTATCACAGAAGATGAATACCTGGAGAATGCCTTGAAGCTGATTCAAGGCAAT
AATCCCAGAGTTCAAACATCCAATTTTCCCAGGGAGTGCATCAGGCGTTTCTTTCCAAAACGGAAGTGTT
TCGTCTTTGACCGGCCAACAAATGACAAAGACCTTCTAGCCAATATTGAGAAGGTGTCAGAAAAGCAACT
GGATCCCAAATTCCAGGAACAAACAAACATTTTCTGTTCTTACATCTTCACTCATGCAAGAACCAAGACC
CTCAGGGAGGGAATCACAGTCACTGGGAATCGTCTGGGAACTCTGGCAGTGACTTATGTAGAGGCCATCA
ACAGTGGAGCAGTGCCTTGTCTGGAGAATGCAGTGATAACTCTGGCCCAGCGTGAGAACTCAGCGGCCGT
GCAGAGGGCAGCTGACTACTACAGCCAGCAGATGGCCCAGCGAGTGAAGCTCCCCACAGACACGCTCCAG
GAGCTGCTGGACATGCATGCGGCCTGTGAGAGGGAAGCCATTGCAATCTTCATGGAGCACTCCTTCAAGG
ATGAAAATCAGGAATTCCAGAAGAAGTTCATGGAAACCACAATGAATAAGAAGGGGGATTTCTTGCTGCA
GAATGAAGAGTCATCTGTTCAATACTGCCAGGCTAAACTCAATGAGCTCTCAAAGGGACTAATGGAAAGT
ATCTCAGCAGGAAGTTTCTCTGTTCCTGGAGGGCACAAGCTCTACATGGAAACAAAGGAAAGGATTGAAC
AGGACTATTGGCAAGTTCCCAGGAAAGGAGTAAAGGCAAAAGAGGTCTTCCAGAGGTTCCTGGAGTCACA
GATGGTGATAGAGGAATCCATCTTGCAGTCAGATAAAGCCCTCACTGATAGAGAGAAGGCAGTAGCAGTG
GATCGGGCCAAGAAGGAGGCAGCTGAGAAGGAACAGGAACTTTTAAAACAGAAATTACAGGAGCAGCAGC
AACAGATGGAGGCTCAAGATAAGAGTCGCAAGGAAAACATAGCCCAACTGAAGGAGAAGCTGCAGATGGA
GAGAGAACACCTACTGAGAGAGCAGATTATGATGTTGGAGCACACGCAGAAGGTCCAAAATGATTGGCTT
CATGAAGGATTTAAGAAGAAGTATGAGGAGATGAATGCAGAGATAAGTCAATTTAAACGTATGATTGATA
CTACAAAAAATGATGATACTCCCTGGATTGCACGAACCTTGGACAACCTTGCCGATGAGCTAACTGCAAT
ATTGTCTGCTCCTGCTAAATTAATTGGTCATGGTGTCAAAGGTGTGAGCTCACTCTTTAAAAAGCATAAG
CTCCCCTTTTAA

Translation (633 aa):
MESGPKMLAPVCLVENNNEQLLVNQQAIQILEKISQPVVVVAIVGLYRTGKSYLMNHLAGQNHGFPLGST
VQSETKGIWMWCVPHPSKPNHTLVLLDTEGLGDVEKGDPKNDSWIFALAVLLCSTFVYNSMSTINHQALE
QLHYVTELTELIKAKSSPRPDGVEDSTEFVSFFPDFLWTVRDFTLELKLNGHPITEDEYLENALKLIQGN
NPRVQTSNFPRECIRRFFPKRKCFVFDRPTNDKDLLANIEKVSEKQLDPKFQEQTNIFCSYIFTHARTKT
LREGITVTGNRLGTLAVTYVEAINSGAVPCLENAVITLAQRENSAAVQRAADYYSQQMAQRVKLPTDTLQ
ELLDMHAACEREAIAIFMEHSFKDENQEFQKKFMETTMNKKGDFLLQNEESSVQYCQAKLNELSKGLMES
ISAGSFSVPGGHKLYMETKERIEQDYWQVPRKGVKAKEVFQRFLESQMVIEESILQSDKALTDREKAVAV
DRAKKEAAEKEQELLKQKLQEQQQQMEAQDKSRKENIAQLKEKLQMEREHLLREQIMMLEHTQKVQNDWL
HEGFKKKYEEMNAEISQFKRMIDTTKNDDTPWIARTLDNLADELTAILSAPAKLIGHGVKGVSSLFKKHK
LPF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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