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Report for CCDS5522.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
5522.1 |
Public |
Homo sapiens |
7 |
PSPH |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:5723](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:5522.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:5723](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 7 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 5522.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000275605.8 |
ENSP00000275605.3 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000275605.8](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000275605.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000275605](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000275605](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000395471.7 |
ENSP00000378854.3 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000395471.7](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000378854.3](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000395471](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000378854](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000437355.6 |
ENSP00000401639.2 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000437355.6](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000401639.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000437355](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000401639](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001370503.1 |
NP_001357432.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001370503.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001357432.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001370503](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001357432](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001357432.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001370504.1 |
NP_001357433.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001370504.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001357433.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001370504](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001357433](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001357433.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001370505.1 |
NP_001357434.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001370505.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001357434.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001370505](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001357434](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001357434.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001370506.1 |
NP_001357435.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001370506.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001357435.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001370506](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001357435](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001357435.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001370507.1 |
NP_001357436.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001370507.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001357436.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001370507](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001357436](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001357436.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001370508.1 |
NP_001357437.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001370508.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001357437.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001370508](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001357437](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001357437.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001370509.1 |
NP_001357438.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001370509.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001357438.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001370509](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001357438](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001357438.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001370510.1 |
NP_001357439.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001370510.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001357439.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001370510](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001357439](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001357439.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001370511.1 |
NP_001357440.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001370511.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001357440.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001370511](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001357440](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001357440.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001370512.1 |
NP_001357441.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001370512.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001357441.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001370512](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001357441](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001357441.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001370513.1 |
NP_001357442.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001370513.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001357442.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001370513](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001357442](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001357442.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001370514.1 |
NP_001357443.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001370514.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001357443.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001370514](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001357443](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001357443.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001370515.1 |
NP_001357444.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001370515.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001357444.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001370515](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001357444](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001357444.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001370516.1 |
NP_001357445.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001370516.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001357445.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001370516](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001357445](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001357445.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001370517.1 |
NP_001357446.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001370517.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001357446.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001370517](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001357446](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001357446.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001370518.1 |
NP_001357447.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001370518.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001357447.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001370518](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001357447](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001357447.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001370519.1 |
NP_001357448.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001370519.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001357448.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001370519](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001357448](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001357448.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001370520.1 |
NP_001357449.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001370520.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001357449.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001370520](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001357449](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001357449.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001370521.1 |
NP_001357450.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001370521.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001357450.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001370521](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001357450](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001357450.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001370522.1 |
NP_001357451.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001370522.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001357451.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001370522](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001357451](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001357451.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_004577.4 |
NP_004568.2 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_004577.4](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_004568.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_004577](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_004568](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_004568.2](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 5522.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (678 nt): ATGGTCTCCCACTCAGAGCTGAGGAAGCTTTTCTACTCAGCAGATGCTGTGTGTTTTGATGTTGACAGCA CGGTCATCAGAGAAGAAGGAATCGATGAGCTAGCCAAAATCTGTGGCGTTGAGGACGCGGTGTCAGAAAT GACACGGCGAGCCATGGGCGGGGCAGTGCCTTTCAAAGCTGCTCTCACAGAGCGCTTAGCCCTCATCCAG CCCTCCAGGGAGCAGGTGCAGAGACTCATAGCAGAGCAACCCCCACACCTGACCCCCGGCATAAGGGAGC TGGTAAGTCGCCTACAGGAGCGAAATGTTCAGGTTTTCCTAATATCTGGTGGCTTTAGGAGTATTGTAGA GCATGTTGCTTCAAAGCTCAATATCCCAGCAACCAATGTATTTGCCAATAGGCTGAAATTCTACTTTAAC GGTGAATATGCAGGTTTTGATGAGACGCAGCCAACAGCTGAATCTGGTGGAAAAGGAAAAGTGATTAAAC TTTTAAAGGAAAAATTTCATTTTAAGAAAATAATCATGATTGGAGATGGTGCCACAGATATGGAAGCCTG TCCTCCTGCTGATGCTTTCATTGGATTTGGAGGAAATGTGATCAGGCAACAAGTCAAGGATAACGCCAAA TGGTATATCACTGATTTTGTAGAGCTGCTGGGAGAACTGGAAGAATAA
Translation (225 aa): MVSHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQ PSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFN GEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAK WYITDFVELLGELEE
|