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Report for CCDS5522.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5522.1 Public Homo sapiens 7 PSPH 24 110 108 CCDS HistoryNCBI Gene:5723Re-query CCDS DB by CCDS ID:5522.1Re-query CCDS DB by GeneID:5723See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5522.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000275605.8 ENSP00000275605.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000275605.8Link to Ensembl Protein Viewer:ENSP00000275605.3Re-query CCDS DB by Nucleotide ID:ENST00000275605Re-query CCDS DB by Protein ID:ENSP00000275605
Original member Current member EBI ENST00000395471.7 ENSP00000378854.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395471.7Link to Ensembl Protein Viewer:ENSP00000378854.3Re-query CCDS DB by Nucleotide ID:ENST00000395471Re-query CCDS DB by Protein ID:ENSP00000378854
Original member Current member EBI ENST00000437355.6 ENSP00000401639.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000437355.6Link to Ensembl Protein Viewer:ENSP00000401639.2Re-query CCDS DB by Nucleotide ID:ENST00000437355Re-query CCDS DB by Protein ID:ENSP00000401639
Original member Current member NCBI NM_001370503.1 NP_001357432.1 Accepted alive Link to Nucleotide Sequence:NM_001370503.1Link to Protein Sequence:NP_001357432.1Re-query CCDS DB by Nucleotide ID:NM_001370503Re-query CCDS DB by Protein ID:NP_001357432Link to BLAST:NP_001357432.1
Original member Current member NCBI NM_001370504.1 NP_001357433.1 Accepted alive Link to Nucleotide Sequence:NM_001370504.1Link to Protein Sequence:NP_001357433.1Re-query CCDS DB by Nucleotide ID:NM_001370504Re-query CCDS DB by Protein ID:NP_001357433Link to BLAST:NP_001357433.1
Original member Current member NCBI NM_001370505.1 NP_001357434.1 Accepted alive Link to Nucleotide Sequence:NM_001370505.1Link to Protein Sequence:NP_001357434.1Re-query CCDS DB by Nucleotide ID:NM_001370505Re-query CCDS DB by Protein ID:NP_001357434Link to BLAST:NP_001357434.1
Original member Current member NCBI NM_001370506.1 NP_001357435.1 Accepted alive Link to Nucleotide Sequence:NM_001370506.1Link to Protein Sequence:NP_001357435.1Re-query CCDS DB by Nucleotide ID:NM_001370506Re-query CCDS DB by Protein ID:NP_001357435Link to BLAST:NP_001357435.1
Original member Current member NCBI NM_001370507.1 NP_001357436.1 Accepted alive Link to Nucleotide Sequence:NM_001370507.1Link to Protein Sequence:NP_001357436.1Re-query CCDS DB by Nucleotide ID:NM_001370507Re-query CCDS DB by Protein ID:NP_001357436Link to BLAST:NP_001357436.1
Original member Current member NCBI NM_001370508.1 NP_001357437.1 Accepted alive Link to Nucleotide Sequence:NM_001370508.1Link to Protein Sequence:NP_001357437.1Re-query CCDS DB by Nucleotide ID:NM_001370508Re-query CCDS DB by Protein ID:NP_001357437Link to BLAST:NP_001357437.1
Original member Current member NCBI NM_001370509.1 NP_001357438.1 Accepted alive Link to Nucleotide Sequence:NM_001370509.1Link to Protein Sequence:NP_001357438.1Re-query CCDS DB by Nucleotide ID:NM_001370509Re-query CCDS DB by Protein ID:NP_001357438Link to BLAST:NP_001357438.1
Original member Current member NCBI NM_001370510.1 NP_001357439.1 Accepted alive Link to Nucleotide Sequence:NM_001370510.1Link to Protein Sequence:NP_001357439.1Re-query CCDS DB by Nucleotide ID:NM_001370510Re-query CCDS DB by Protein ID:NP_001357439Link to BLAST:NP_001357439.1
Original member Current member NCBI NM_001370511.1 NP_001357440.1 Accepted alive Link to Nucleotide Sequence:NM_001370511.1Link to Protein Sequence:NP_001357440.1Re-query CCDS DB by Nucleotide ID:NM_001370511Re-query CCDS DB by Protein ID:NP_001357440Link to BLAST:NP_001357440.1
Original member Current member NCBI NM_001370512.1 NP_001357441.1 Accepted alive Link to Nucleotide Sequence:NM_001370512.1Link to Protein Sequence:NP_001357441.1Re-query CCDS DB by Nucleotide ID:NM_001370512Re-query CCDS DB by Protein ID:NP_001357441Link to BLAST:NP_001357441.1
Original member Current member NCBI NM_001370513.1 NP_001357442.1 Accepted alive Link to Nucleotide Sequence:NM_001370513.1Link to Protein Sequence:NP_001357442.1Re-query CCDS DB by Nucleotide ID:NM_001370513Re-query CCDS DB by Protein ID:NP_001357442Link to BLAST:NP_001357442.1
Original member Current member NCBI NM_001370514.1 NP_001357443.1 Accepted alive Link to Nucleotide Sequence:NM_001370514.1Link to Protein Sequence:NP_001357443.1Re-query CCDS DB by Nucleotide ID:NM_001370514Re-query CCDS DB by Protein ID:NP_001357443Link to BLAST:NP_001357443.1
Original member Current member NCBI NM_001370515.1 NP_001357444.1 Accepted alive Link to Nucleotide Sequence:NM_001370515.1Link to Protein Sequence:NP_001357444.1Re-query CCDS DB by Nucleotide ID:NM_001370515Re-query CCDS DB by Protein ID:NP_001357444Link to BLAST:NP_001357444.1
Original member Current member NCBI NM_001370516.1 NP_001357445.1 Accepted alive Link to Nucleotide Sequence:NM_001370516.1Link to Protein Sequence:NP_001357445.1Re-query CCDS DB by Nucleotide ID:NM_001370516Re-query CCDS DB by Protein ID:NP_001357445Link to BLAST:NP_001357445.1
Original member Current member NCBI NM_001370517.1 NP_001357446.1 Accepted alive Link to Nucleotide Sequence:NM_001370517.1Link to Protein Sequence:NP_001357446.1Re-query CCDS DB by Nucleotide ID:NM_001370517Re-query CCDS DB by Protein ID:NP_001357446Link to BLAST:NP_001357446.1
Original member Current member NCBI NM_001370518.1 NP_001357447.1 Accepted alive Link to Nucleotide Sequence:NM_001370518.1Link to Protein Sequence:NP_001357447.1Re-query CCDS DB by Nucleotide ID:NM_001370518Re-query CCDS DB by Protein ID:NP_001357447Link to BLAST:NP_001357447.1
Original member Current member NCBI NM_001370519.1 NP_001357448.1 Accepted alive Link to Nucleotide Sequence:NM_001370519.1Link to Protein Sequence:NP_001357448.1Re-query CCDS DB by Nucleotide ID:NM_001370519Re-query CCDS DB by Protein ID:NP_001357448Link to BLAST:NP_001357448.1
Original member Current member NCBI NM_001370520.1 NP_001357449.1 Accepted alive Link to Nucleotide Sequence:NM_001370520.1Link to Protein Sequence:NP_001357449.1Re-query CCDS DB by Nucleotide ID:NM_001370520Re-query CCDS DB by Protein ID:NP_001357449Link to BLAST:NP_001357449.1
Original member Current member NCBI NM_001370521.1 NP_001357450.1 Accepted alive Link to Nucleotide Sequence:NM_001370521.1Link to Protein Sequence:NP_001357450.1Re-query CCDS DB by Nucleotide ID:NM_001370521Re-query CCDS DB by Protein ID:NP_001357450Link to BLAST:NP_001357450.1
Original member Current member NCBI NM_001370522.1 NP_001357451.1 Accepted alive Link to Nucleotide Sequence:NM_001370522.1Link to Protein Sequence:NP_001357451.1Re-query CCDS DB by Nucleotide ID:NM_001370522Re-query CCDS DB by Protein ID:NP_001357451Link to BLAST:NP_001357451.1
Original member Current member NCBI NM_004577.4 NP_004568.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004577.4Link to Protein Sequence:NP_004568.2Re-query CCDS DB by Nucleotide ID:NM_004577Re-query CCDS DB by Protein ID:NP_004568Link to BLAST:NP_004568.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001357432.1 225 P78330 225 100% 0 0
NP_001357433.1 225 P78330 225 100% 0 0
NP_001357434.1 225 P78330 225 100% 0 0
NP_001357435.1 225 P78330 225 100% 0 0
NP_001357436.1 225 P78330 225 100% 0 0
NP_001357437.1 225 P78330 225 100% 0 0
NP_001357438.1 225 P78330 225 100% 0 0
NP_001357439.1 225 P78330 225 100% 0 0
NP_001357440.1 225 P78330 225 100% 0 0
NP_001357441.1 225 P78330 225 100% 0 0
NP_001357442.1 225 P78330 225 100% 0 0
NP_001357443.1 225 P78330 225 100% 0 0
NP_001357444.1 225 P78330 225 100% 0 0
NP_001357445.1 225 P78330 225 100% 0 0
NP_001357446.1 225 P78330 225 100% 0 0
NP_001357447.1 225 P78330 225 100% 0 0
NP_001357448.1 225 P78330 225 100% 0 0
NP_001357449.1 225 P78330 225 100% 0 0
NP_001357450.1 225 P78330 225 100% 0 0
NP_001357451.1 225 P78330 225 100% 0 0
NP_004568.2 225 P78330 225 100% 0 0

Chromosomal Locations for CCDS 5522.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 56011762 56011869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56015023 56015171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56017234 56017379 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56019600 56019734 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56021073 56021212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (678 nt):
ATGGTCTCCCACTCAGAGCTGAGGAAGCTTTTCTACTCAGCAGATGCTGTGTGTTTTGATGTTGACAGCA
CGGTCATCAGAGAAGAAGGAATCGATGAGCTAGCCAAAATCTGTGGCGTTGAGGACGCGGTGTCAGAAAT
GACACGGCGAGCCATGGGCGGGGCAGTGCCTTTCAAAGCTGCTCTCACAGAGCGCTTAGCCCTCATCCAG
CCCTCCAGGGAGCAGGTGCAGAGACTCATAGCAGAGCAACCCCCACACCTGACCCCCGGCATAAGGGAGC
TGGTAAGTCGCCTACAGGAGCGAAATGTTCAGGTTTTCCTAATATCTGGTGGCTTTAGGAGTATTGTAGA
GCATGTTGCTTCAAAGCTCAATATCCCAGCAACCAATGTATTTGCCAATAGGCTGAAATTCTACTTTAAC
GGTGAATATGCAGGTTTTGATGAGACGCAGCCAACAGCTGAATCTGGTGGAAAAGGAAAAGTGATTAAAC
TTTTAAAGGAAAAATTTCATTTTAAGAAAATAATCATGATTGGAGATGGTGCCACAGATATGGAAGCCTG
TCCTCCTGCTGATGCTTTCATTGGATTTGGAGGAAATGTGATCAGGCAACAAGTCAAGGATAACGCCAAA
TGGTATATCACTGATTTTGTAGAGCTGCTGGGAGAACTGGAAGAATAA

Translation (225 aa):
MVSHSELRKLFYSADAVCFDVDSTVIREEGIDELAKICGVEDAVSEMTRRAMGGAVPFKAALTERLALIQ
PSREQVQRLIAEQPPHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYFN
GEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAK
WYITDFVELLGELEE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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