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Report for CCDS51399.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
51399.1 |
Public |
Mus musculus |
4 |
Arhgef16 |
23 |
108 |
98 |
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Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61
Review status: Provisional (this record has not been manually reviewed by the collaboration) Sequence IDs included in CCDS 51399.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000030898.11 |
ENSMUSP00000030898.5 |
Accepted |
alive |
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EBI |
ENSMUST00000169623.7 |
ENSMUSP00000126296.1 |
Accepted |
alive |
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NCBI |
NM_001112744.1 |
NP_001106215.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001106215.1 |
713 |
Q3U5C8 |
713 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 51399.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2142 nt): ATGTCCCAGAGACATTCTGACAGCTCTCTGGATGAGAAACTACTGGAGTATCGCTTCCACGCAGAGCTGC GCCTCGATGCCAACGGGAACCCTATCCCTGGACTCCCCATGGTCCGGAGCTCCTTGAAAGCCAGAGCCAA TGCTGCCTTTGAGCCAGATGCCTCAGAACCCCTGCCGCCACCTCCGTCACCAGAAGACGAAGAGCCTCCT CGGCCCATCGTCCTTAGCACGCAAAGCCCCGCGGCCCTCAAGATGGGCACGCAGCAGCTCATCCCCAAAA GTCTGGCTGTGGCCAGCAAGGCCAAGACCAAGTCCCCAGCCCGCCACCAGAGCTTTGGGGCGGCTGTGCT CAGCAAGGAGGCTGCCAGGCGGAATCCTCAGCTCTTCTCAGCCCCCAGCTTCTCGTTGGATGACATGGAT ATGGACATGGTTACTACCGGGAACCTGAGGCGCAACCTGAGGAACCAGTCCTACAGGGCAGCCATGAAGG GGCCGGGGCCACCCAGTAGCAAGGGGGACTCAGTCCAGCTTGGCCCCAAGCTCCAGGCTCTCGCTGAGGA GGCTGCTCAGCCTCCCTCCCGGTATCCAGCCAAAAATAAGAAAACTCTCGGTCGGAAACGTGCGCACAAG GGCTCTTTCAAAGATGACCCCCAGCTGTATCAGGAGATCCGAGAGCGGGGTTTGAACACCAGTCACGAGT CCGATGATGACATTCTTGATGAGCCCTCCGGCCCAGTGGGAACTCAGAGAGCGGACACCACCATCGTGGT CAAGAGCTATCGGCCTGCTCAGCTCACCTGGAGCCAGCTCCCAGAGGTGCTGGAGTCAGGTGTCCTGGAC ACGCTGTCAACGGAAGAACGGAAGAGGCAGGAGGCCATCTTCGAGATCCTCACTTCTGAGTTCTCGTATC TGCACAGCCTGAGCATCCTGGTGACTGAGTTCCTGCAGTCCCGGGAGCTGAGGGCCACTATGACCCAGAC GGAACACCACCACCTCTTCTCCAACATCTTGGATGTGATGTCTGCCAGTCAGAAGTTCTTTGAAGCCCTG GAGCAGCGGCACAAAGCTCAGGTGTGCGTGGAGGACATCAGCGACATCTTGGAGGACCATGCTCAGCATC ATTTCCACCCTTACATCGCCTACTGCTCCAACGAGGTCTATCAACAGCGCACCCTGCAGAAGCTGTCGAA CAGCAACGCAGCCTTCCGGGACGTTCTGAAGGAGATCGAGAAGCGGCCTGCGTGTGGGGGCCTGCCCATG ATCTCTTTCCTGATTCTCCCCATGCAGAGAGTGACCCGGCTGCCGCTGCTGACAGATACACTCTGCCTGA AGACGCAAGGCCATCCCGAACGGTATAAAGCTGCCAGCCAAGCCCTGAAGGCCATCAGCAAGCTGGTGAA GCAGTGTAACGAGGGAGCTCACAAGATGGAGCGCACAGAGCAGATATACACACTGAACATGCAGCTGGAC TTCGGCAAGGTCAAGTCCCTCCCGCTCATCTCCGCCTCTCGCTGGCTGCTGAAGCGTGGGGAGCTCTTCC TCTTGGAGGAATCCAGTATCTTTAGGAAAATCGCCAGCCGACCCACGTGTTATCTGTTCCTGTTCAATGA TGTCCTGGTTGTCACCAAGAAGAAAAGTGAGGAAAGCTACCTGGTCCAAGACTACGCGCAGCTAGACCAC GTACAGGTCAGGAAACTGGAACCCTCGGAGCCCTTGCTGCCAGGAGGCAGCAGCCGCAGCTCCTCCGTGC CCTACCCATTCCAGGTGAACCTGCTACATAACAGCGAGGGCCGCCAGGAGCAGATACTGCTGTCGTCCGA CTCTGCGAGTGACCGGGCCCGGTGGATCACAGCACTCACCTACAAGGAGAGACAGTGGCAGGGCATCACC AACAAAGGAGAACTCCCCCAGGTAGAGGTCACCAAGGCGTACTTTGCCAAGCAGGCTGATGAGATCACAC TGCAACAGGCTGACATCGTCCTGGTCCTGCAGGAAGAGGACGGTTGGCTACACGGGGAGCGGCTTCGGGA CGGAGAGACCGGCTGGTTTCCCGAGAGCTTTGCTCACTCCATCACCAGCCGTGTGGCCGTGGAAGGCAAC GTGCGCAGGATGGAGCGGCTGCGGGTGGAGACGGATGTGTAG
Translation (713 aa): MSQRHSDSSLDEKLLEYRFHAELRLDANGNPIPGLPMVRSSLKARANAAFEPDASEPLPPPPSPEDEEPP RPIVLSTQSPAALKMGTQQLIPKSLAVASKAKTKSPARHQSFGAAVLSKEAARRNPQLFSAPSFSLDDMD MDMVTTGNLRRNLRNQSYRAAMKGPGPPSSKGDSVQLGPKLQALAEEAAQPPSRYPAKNKKTLGRKRAHK GSFKDDPQLYQEIRERGLNTSHESDDDILDEPSGPVGTQRADTTIVVKSYRPAQLTWSQLPEVLESGVLD TLSTEERKRQEAIFEILTSEFSYLHSLSILVTEFLQSRELRATMTQTEHHHLFSNILDVMSASQKFFEAL EQRHKAQVCVEDISDILEDHAQHHFHPYIAYCSNEVYQQRTLQKLSNSNAAFRDVLKEIEKRPACGGLPM ISFLILPMQRVTRLPLLTDTLCLKTQGHPERYKAASQALKAISKLVKQCNEGAHKMERTEQIYTLNMQLD FGKVKSLPLISASRWLLKRGELFLLEESSIFRKIASRPTCYLFLFNDVLVVTKKKSEESYLVQDYAQLDH VQVRKLEPSEPLLPGGSSRSSSVPYPFQVNLLHNSEGRQEQILLSSDSASDRARWITALTYKERQWQGIT NKGELPQVEVTKAYFAKQADEITLQQADIVLVLQEEDGWLHGERLRDGETGWFPESFAHSITSRVAVEGN VRRMERLRVETDV
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