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Report for CCDS33125.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33125.1 Public Homo sapiens 19 ZIM3 24 110 108 CCDS HistoryNCBI Gene:114026Re-query CCDS DB by CCDS ID:33125.1Re-query CCDS DB by GeneID:114026See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33125.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000269834.1 ENSP00000269834.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000269834.1Link to Ensembl Protein Viewer:ENSP00000269834.1Re-query CCDS DB by Nucleotide ID:ENST00000269834Re-query CCDS DB by Protein ID:ENSP00000269834
Original member Current member NCBI NM_052882.1 NP_443114.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_052882.1Link to Protein Sequence:NP_443114.1Re-query CCDS DB by Nucleotide ID:NM_052882Re-query CCDS DB by Protein ID:NP_443114Link to BLAST:NP_443114.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_443114.1 472 Q96PE6 472 100% 0 0

Chromosomal Locations for CCDS 33125.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 57134918 57136095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57136873 57136971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57138472 57138598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57142629 57142643 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1419 nt):
ATGAACAATTCCCAGGGAAGAGTGACCTTCGAGGATGTCACTGTGAACTTCACCCAGGGGGAGTGGCAGC
GGCTGAATCCCGAACAGAGAAACTTGTACAGGGATGTGATGCTGGAGAATTACAGCAACCTTGTCTCTGT
GGGACAAGGGGAAACCACCAAACCCGATGTGATCTTGAGGTTGGAACAAGGAAAGGAGCCATGGTTGGAG
GAAGAGGAAGTGCTGGGAAGTGGCCGTGCAGAAAAAAATGGGGACATTGGAGGGCAGATTTGGAAGCCAA
AGGATGTGAAAGAGAGTCTCGCAAGAGAAGTCCCATCAATCAATAAGGAAACGCTGACTACGCAGAAAGG
TGTAGAATGTGACGGATCTAAGAAAATACTTCCACTGGGCATAGATGATGTATCTTCCTTGCAACACTAT
GTACAAAATAATTCTCACGATGATAATGGATACAGAAAATTAGTTGGCAATAATCCATCCAAATTTGTAG
GACAACAACTGAAATGTAATGCCTGTAGAAAGTTATTCAGTTCAAAGTCACGCCTTCAAAGTCACCTGAG
GAGGCATGCCTGTCAAAAACCCTTTGAATGTCATAGCTGTGGAAGAGCATTCGGGGAGAAGTGGAAGCTT
GATAAACATCAGAAAACTCACGCAGAGGAAAGGCCCTATAAATGTGAGAACTGTGGAAATGCCTACAAGC
AGAAGTCAAATCTCTTTCAACATCAGAAAATGCATACTAAAGAGAAACCCTATCAGTGTAAGACATGTGG
AAAAGCCTTTTCCTGGAAATCATCCTGCATTAATCATGAGAAAATTCATAATGCCAAGAAATCCTATCAG
TGTAATGAATGTGAGAAATCCTTCAGGCAGAACTCAACCCTCATTCAACATAAAAAAGTTCACACTGGAC
AAAAACCCTTTCAATGTACGGACTGTGGAAAGGCTTTCATTTACAAGTCAGATCTTGTGAAACACCAGAG
AATACACACGGGAGAGAAACCCTATAAATGTAGCATATGTGAGAAGGCCTTTTCCCAGAAATCCAATGTC
ATCGATCATGAGAAAATTCACACTGGGAAGAGAGCTTATGAGTGTGATCTATGTGGAAATACCTTTATCC
AGAAGAAAAACCTCATTCAACATAAAAAAATCCATACTGGGGAAAAGCCCTATGAATGTAACAGATGTGG
AAAAGCCTTCTTTCAGAAGTCAAACCTTCATAGCCATCAGAAAACTCATAGCGGAGAGAGGACCTATAGA
TGTAGTGAATGTGGAAAAACCTTCATCCGGAAATTAAACCTTAGTTTGCATAAAAAAACCCATACTGGAC
AAAAACCTTATGGATGTTCTGAATGCGGTAAAGCCTTCGCTGACAGGTCATACCTTGTTAGGCACCAGAA
AAGAATTCACTCCAGATAG

Translation (472 aa):
MNNSQGRVTFEDVTVNFTQGEWQRLNPEQRNLYRDVMLENYSNLVSVGQGETTKPDVILRLEQGKEPWLE
EEEVLGSGRAEKNGDIGGQIWKPKDVKESLAREVPSINKETLTTQKGVECDGSKKILPLGIDDVSSLQHY
VQNNSHDDNGYRKLVGNNPSKFVGQQLKCNACRKLFSSKSRLQSHLRRHACQKPFECHSCGRAFGEKWKL
DKHQKTHAEERPYKCENCGNAYKQKSNLFQHQKMHTKEKPYQCKTCGKAFSWKSSCINHEKIHNAKKSYQ
CNECEKSFRQNSTLIQHKKVHTGQKPFQCTDCGKAFIYKSDLVKHQRIHTGEKPYKCSICEKAFSQKSNV
IDHEKIHTGKRAYECDLCGNTFIQKKNLIQHKKIHTGEKPYECNRCGKAFFQKSNLHSHQKTHSGERTYR
CSECGKTFIRKLNLSLHKKTHTGQKPYGCSECGKAFADRSYLVRHQKRIHSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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