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Report for CCDS43888.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43888.1 Public Homo sapiens 9 IER5L 24 110 108 CCDS HistoryNCBI Gene:389792Re-query CCDS DB by CCDS ID:43888.1Re-query CCDS DB by GeneID:389792See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43888.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372491.4 ENSP00000361569.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372491.4Link to Ensembl Protein Viewer:ENSP00000361569.2Re-query CCDS DB by Nucleotide ID:ENST00000372491Re-query CCDS DB by Protein ID:ENSP00000361569
Original member Current member NCBI NM_203434.3 NP_982258.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_203434.3Link to Protein Sequence:NP_982258.2Re-query CCDS DB by Nucleotide ID:NM_203434Re-query CCDS DB by Protein ID:NP_982258Link to BLAST:NP_982258.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_982258.2 404 Q5T953-1 404 100% 0 0

Chromosomal Locations for CCDS 43888.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 129176838 129178052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1215 nt):
ATGGAGTGCGCCCTGGACGCCCAGAGCCTGATCAGCATCTCCCTGCGCAAGATCCACAGCTCCCGAACCC
AGCGCGGCGGCATCAAGCTGCACAAGAACCTCCTGGTGTCCTACGTGCTCCGCAACGCGCGCCAGCTCTA
CCTGAGCGAGCGCTACGCCGAGCTCTACCGGCGCCAGCAGCAGCAGCAACAGCAGCAGCCGCCCCACCAC
CAGCACCAGCACCTAGCGTACGCGGCGCCGGGCATGCCGGCCAGCGCGGCCGACTTCGGCCCGCTCCAAC
TTGGCGGCGGCGGGGACGCGGAGGCGCGCGAGCCGGCCGCCCGGCACCAGCTGCACCAGCTCCACCAGCT
CCACCAGCTGCACCTCCAGCAGCAGCTGCACCAGCACCAGCACCCGGCGCCCAGGGGCTGCGCGGCGGCG
GCGGCGGCCGGAGCGCCCGCGGGCGGCGCGGGGGCGCTCTCGGAGCTGCCCGGGTGCGCCGCGCTCCAGC
CGCCGCACGGCGCGCCCCACCGCGGGCAGCCCTTGGAGCCTCTGCAGCCGGGTCCTGCGCCGCTGCCGCT
GCCGCTGCCGCCGCCCGCGCCCGCTGCGCTCTGCCCGCGGGACCCTCGCGCCCCGGCCGCCTGCTCCGCG
CCCCCAGGGGCCGCCCCTCCGGCCGCCGCCGCTTCTCCGCCCGCCTCCCCGGCCCCCGCCTCCTCCCCCG
GCTTCTACCGGGGCGCATACCCTACCCCTTCGGACTTCGGCTTGCACTGCAGCAGCCAGACCACCGTGCT
GGACCTAGACACTCACGTGGTGACCACGGTGGAGAACGGCTACTTGCACCAGGACTGCTGCGCCTCCGCC
CACTGCCCCTGCTGTGGCCAGGGCGCTCCGGGACCGGGCCTGGCGTCCGCCGCCGGCTGCAAGCGCAAGT
ATTACCCTGGCCAGGAGGAGGAGGAAGACGACGAGGAGGATGCGGGCGGGCTGGGGGCCGAGCCCCCCGG
GGGCGCCCCGTTCGCCCCCTGCAAGCGCGCCCGCTTCGAGGACTTCTGCCCGGACTCGTCCCCGGACGCG
TCCAACATCTCAAACTTGATCTCCATCTTTGGCTCCGGCTTCTCGGGGCTGGTGAGCCGACAGCCGGACT
CCTCGGAGCAGCCGCCGCCGCTCAACGGGCAGCTGTGCGCCAAGCAGGCGCTCGCCAGCCTCGGCGCCTG
GACTCGAGCCATTGTCGCCTTCTAG

Translation (404 aa):
MECALDAQSLISISLRKIHSSRTQRGGIKLHKNLLVSYVLRNARQLYLSERYAELYRRQQQQQQQQPPHH
QHQHLAYAAPGMPASAADFGPLQLGGGGDAEAREPAARHQLHQLHQLHQLHLQQQLHQHQHPAPRGCAAA
AAAGAPAGGAGALSELPGCAALQPPHGAPHRGQPLEPLQPGPAPLPLPLPPPAPAALCPRDPRAPAACSA
PPGAAPPAAAASPPASPAPASSPGFYRGAYPTPSDFGLHCSSQTTVLDLDTHVVTTVENGYLHQDCCASA
HCPCCGQGAPGPGLASAAGCKRKYYPGQEEEEDDEEDAGGLGAEPPGGAPFAPCKRARFEDFCPDSSPDA
SNISNLISIFGSGFSGLVSRQPDSSEQPPPLNGQLCAKQALASLGAWTRAIVAF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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