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Report for CCDS5854.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5854.1 Public Homo sapiens 7 KLRG2 24 110 108 CCDS HistoryNCBI Gene:346689Re-query CCDS DB by CCDS ID:5854.1Re-query CCDS DB by GeneID:346689See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5854.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000340940.5 ENSP00000339356.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000340940.5Link to Ensembl Protein Viewer:ENSP00000339356.4Re-query CCDS DB by Nucleotide ID:ENST00000340940Re-query CCDS DB by Protein ID:ENSP00000339356
Original member Current member NCBI NM_198508.4 NP_940910.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198508.4Link to Protein Sequence:NP_940910.1Re-query CCDS DB by Nucleotide ID:NM_198508Re-query CCDS DB by Protein ID:NP_940910Link to BLAST:NP_940910.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_940910.1 409 A4D1S0-1 409 100% 0 0

Chromosomal Locations for CCDS 5854.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 139453587 139453707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139454111 139454214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139479627 139479772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139480146 139480247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 139482886 139483642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1230 nt):
ATGGAGGAGTCTTGGGAGGCTGCGCCCGGAGGCCAAGCCGGGGCAGAGCTCCCAATGGAGCCCGTGGGAA
GCCTGGTCCCCACGCTGGAGCAGCCGCAGGTGCCCGCGAAGGTGCGACAACCTGAAGGTCCCGAAAGCAG
CCCAAGTCCGGCCGGGGCCGTGGAGAAGGCGGCGGGCGCAGGCCTGGAGCCCTCGAGCAAGAAAAAGCCG
CCTTCGCCTCGCCCCGGGTCCCCGCGCGTGCCGCCGCTCAGCCTGGGCTACGGGGTCTGCCCCGAGCCGC
CGTCACCGGGCCCTGCCTTGGTCAAGCTGCCCCGGAATGGCGAGGCGCCCGGGGCTGAGCCTGCGCCCAG
CGCCTGGGCGCCCATGGAGCTGCAGGTAGATGTGCGCGTGAAGCCCGTGGGCGCGGCCGGTGGCAGCAGC
ACGCCATCGCCCAGGCCCTCCACGCGCTTCCTCAAGGTGCCGGTGCCCGAGTCCCCTGCCTTCTCCCGCC
ACGCGGACCCGGCGCACCAGCTCCTGCTGCGCGCACCATCCCAGGGCGGCACGTGGGGCCGCCGCTCGCC
GCTGGCTGCAGCCCGGACGGAGAGCGGCTGCGACGCAGAGGGCCGGGCCAGCCCCGCGGAAGGAAGCGCC
GGCTCCCCGGGCTCCCCCACGTGCTGCCGCTGCAAGGAGCTGGGGCTGGAGAAGGAGGATGCGGCGCTGT
TGCCCCGCGCGGGGTTGGACGGCGACGAGAAGCTGCCCCGGGCCGTAACGCTTACGGGGCTACCCATGTA
CGTGAAGTCCCTGTACTGGGCCCTGGCGTTCATGGCTGTGCTCCTGGCAGTCTCTGGGGTTGTCATTGTG
GTCCTGGCCTCAAGAGCAGGAGCCAGATGCCAGCAGTGCCCCCCAGGCTGGGTGTTGTCCGAGGAGCACT
GTTACTACTTCTCTGCAGAAGCGCAGGCCTGGGAAGCCAGCCAGGCTTTCTGCTCAGCCTACCACGCTAC
CCTCCCCCTGCTAAGCCACACCCAGGACTTCCTGGGCAGATACCCAGTCTCCAGGCACTCCTGGGTGGGG
GCCTGGCGAGGCCCCCAGGGCTGGCACTGGATCGACGAGGCCCCACTCCCGCCCCAGCTACTCCCTGAGG
ACGGCGAGGACAATCTGGATATCAACTGTGGGGCCCTGGAGGAAGGCACGCTGGTGGCTGCAAACTGCAG
CACTCCAAGACCCTGGGTCTGTGCCAAGGGGACCCAGTGA

Translation (409 aa):
MEESWEAAPGGQAGAELPMEPVGSLVPTLEQPQVPAKVRQPEGPESSPSPAGAVEKAAGAGLEPSSKKKP
PSPRPGSPRVPPLSLGYGVCPEPPSPGPALVKLPRNGEAPGAEPAPSAWAPMELQVDVRVKPVGAAGGSS
TPSPRPSTRFLKVPVPESPAFSRHADPAHQLLLRAPSQGGTWGRRSPLAAARTESGCDAEGRASPAEGSA
GSPGSPTCCRCKELGLEKEDAALLPRAGLDGDEKLPRAVTLTGLPMYVKSLYWALAFMAVLLAVSGVVIV
VLASRAGARCQQCPPGWVLSEEHCYYFSAEAQAWEASQAFCSAYHATLPLLSHTQDFLGRYPVSRHSWVG
AWRGPQGWHWIDEAPLPPQLLPEDGEDNLDINCGALEEGTLVAANCSTPRPWVCAKGTQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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