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Report for CCDS5556.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5556.1 Public Homo sapiens 7 DNAJC30 24 110 108 CCDS HistoryNCBI Gene:84277Re-query CCDS DB by CCDS ID:5556.1Re-query CCDS DB by GeneID:84277See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5556.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395176.3 ENSP00000378605.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395176.3Link to Ensembl Protein Viewer:ENSP00000378605.1Re-query CCDS DB by Nucleotide ID:ENST00000395176Re-query CCDS DB by Protein ID:ENSP00000378605
Original member Current member NCBI NM_032317.3 NP_115693.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032317.3Link to Protein Sequence:NP_115693.2Re-query CCDS DB by Nucleotide ID:NM_032317Re-query CCDS DB by Protein ID:NP_115693Link to BLAST:NP_115693.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115693.2 226 Q96LL9 226 100% 0 0

Chromosomal Locations for CCDS 5556.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 73682743 73683423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (681 nt):
ATGGCAGCCATGCGCTGGCGATGGTGGCAGCGGCTGTTACCTTGGAGGTTGCTGCAGGCCCGTGGCTTTC
CACAAAATTCTGCACCCAGCCTGGGCCTAGGAGCGAGGACTTATTCCCAGGGCGACTGCTCGTATTCGCG
CACGGCGCTGTATGATCTGCTCGGCGTCCCCTCCACAGCCACGCAGGCCCAAATCAAGGCGGCTTACTAC
CGTCAGTGCTTTCTCTACCACCCGGACCGCAACTCCGGGAGCGCGGAGGCCGCCGAGCGCTTCACGCGCA
TCTCCCAGGCCTACGTGGTGCTGGGCAGTGCCACCCTCCGTCGCAAGTATGATCGCGGCCTACTCAGCGA
CGAGGACCTGCGCGGACCTGGCGTCCGGCCCTCCAGGACGCCCGCACCCGACCCCGGCTCGCCGCGTACC
CCGCCGCCCACCTCTCGGACCCACGACGGTTCTCGGGCCTCCCCCGGCGCCAACCGCACGATGTTCAACT
TTGACGCCTTCTACCAGGCCCACTACGGGGAACAACTGGAGCGGGAACGGCGCCTGAGGGCCCGGCGGGA
GGCCCTTCGCAAACGGCAGGAGTATCGGTCCATGAAAGGCCTCCGCTGGGAGGATACCCGAGACACGGCT
GCCATTTTCCTCATCTTTTCAATCTTCATCATCATCGGCTTTTATATTTAA

Translation (226 aa):
MAAMRWRWWQRLLPWRLLQARGFPQNSAPSLGLGARTYSQGDCSYSRTALYDLLGVPSTATQAQIKAAYY
RQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLSDEDLRGPGVRPSRTPAPDPGSPRT
PPPTSRTHDGSRASPGANRTMFNFDAFYQAHYGEQLERERRLRARREALRKRQEYRSMKGLRWEDTRDTA
AIFLIFSIFIIIGFYI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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